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ENDOU (endonuclease, poly(U) specific)

Identity

Alias_namesendonuclease
Alias_symbol (synonym)PP11
P11
PRSS26
Other alias
HGNC (Hugo) ENDOU
LocusID (NCBI) 8909
Atlas_Id 41622
Location 12q13.11  [Link to chromosome band 12q13]
Location_base_pair Starts at 47709735 and ends at 47725572 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ENDOU   14369
Cards
Entrez_Gene (NCBI)ENDOU  8909  endonuclease, poly(U) specific
AliasesP11; PP11; PRSS26
GeneCards (Weizmann)ENDOU
Ensembl hg19 (Hinxton)ENSG00000111405 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111405 [Gene_View]  chr12:47709735-47725572 [Contig_View]  ENDOU [Vega]
ICGC DataPortalENSG00000111405
TCGA cBioPortalENDOU
AceView (NCBI)ENDOU
Genatlas (Paris)ENDOU
WikiGenes8909
SOURCE (Princeton)ENDOU
Genetics Home Reference (NIH)ENDOU
Genomic and cartography
GoldenPath hg38 (UCSC)ENDOU  -     chr12:47709735-47725572 -  12q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ENDOU  -     12q13.11   [Description]    (hg19-Feb_2009)
EnsemblENDOU - 12q13.11 [CytoView hg19]  ENDOU - 12q13.11 [CytoView hg38]
Mapping of homologs : NCBIENDOU [Mapview hg19]  ENDOU [Mapview hg38]
OMIM606720   
Gene and transcription
Genbank (Entrez)AI039727 AK075446 AK295963 AK300169 AK302308
RefSeq transcript (Entrez)NM_001172439 NM_001172440 NM_006025
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ENDOU
Cluster EST : UnigeneHs.997 [ NCBI ]
CGAP (NCI)Hs.997
Alternative Splicing GalleryENSG00000111405
Gene ExpressionENDOU [ NCBI-GEO ]   ENDOU [ EBI - ARRAY_EXPRESS ]   ENDOU [ SEEK ]   ENDOU [ MEM ]
Gene Expression Viewer (FireBrowse)ENDOU [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8909
GTEX Portal (Tissue expression)ENDOU
Protein : pattern, domain, 3D structure
UniProt/SwissProtP21128   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP21128  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP21128
Splice isoforms : SwissVarP21128
Catalytic activity : Enzyme3.1.-.- [ Enzyme-Expasy ]   3.1.-.-3.1.-.- [ IntEnz-EBI ]   3.1.-.- [ BRENDA ]   3.1.-.- [ KEGG ]   
PhosPhoSitePlusP21128
Domaine pattern : Prosite (Expaxy)SMB_1 (PS00524)    SMB_2 (PS50958)   
Domains : Interpro (EBI)Endoribonuclease_XendoU    Somatomedin_B_chordata    Somatomedin_B_dom   
Domain families : Pfam (Sanger)Somatomedin_B (PF01033)    XendoU (PF09412)   
Domain families : Pfam (NCBI)pfam01033    pfam09412   
Domain families : Smart (EMBL)SO (SM00201)  
Conserved Domain (NCBI)ENDOU
DMDM Disease mutations8909
Blocks (Seattle)ENDOU
SuperfamilyP21128
Human Protein AtlasENSG00000111405
Peptide AtlasP21128
HPRD12110
IPIIPI00795429   IPI00006995   IPI00956135   IPI00922894   
Protein Interaction databases
DIP (DOE-UCLA)P21128
IntAct (EBI)P21128
FunCoupENSG00000111405
BioGRIDENDOU
STRING (EMBL)ENDOU
ZODIACENDOU
Ontologies - Pathways
QuickGOP21128
Ontology : AmiGORNA binding  endoribonuclease activity  scavenger receptor activity  extracellular region  extracellular space  cytoplasm  cytoplasm  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  female pregnancy  growth factor activity  serine-type peptidase activity  serine-type peptidase activity  manganese ion binding  polysaccharide binding  RNA phosphodiester bond hydrolysis, endonucleolytic  
Ontology : EGO-EBIRNA binding  endoribonuclease activity  scavenger receptor activity  extracellular region  extracellular space  cytoplasm  cytoplasm  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  female pregnancy  growth factor activity  serine-type peptidase activity  serine-type peptidase activity  manganese ion binding  polysaccharide binding  RNA phosphodiester bond hydrolysis, endonucleolytic  
NDEx NetworkENDOU
Atlas of Cancer Signalling NetworkENDOU
Wikipedia pathwaysENDOU
Orthology - Evolution
OrthoDB8909
GeneTree (enSembl)ENSG00000111405
Phylogenetic Trees/Animal Genes : TreeFamENDOU
HOVERGENP21128
HOGENOMP21128
Homologs : HomoloGeneENDOU
Homology/Alignments : Family Browser (UCSC)ENDOU
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerENDOU [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ENDOU
dbVarENDOU
ClinVarENDOU
1000_GenomesENDOU 
Exome Variant ServerENDOU
ExAC (Exome Aggregation Consortium)ENDOU (select the gene name)
Genetic variants : HAPMAP8909
Genomic Variants (DGV)ENDOU [DGVbeta]
DECIPHERENDOU [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisENDOU 
Mutations
ICGC Data PortalENDOU 
TCGA Data PortalENDOU 
Broad Tumor PortalENDOU
OASIS PortalENDOU [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICENDOU  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDENDOU
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ENDOU
DgiDB (Drug Gene Interaction Database)ENDOU
DoCM (Curated mutations)ENDOU (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ENDOU (select a term)
intoGenENDOU
Cancer3DENDOU(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606720   
Orphanet
MedgenENDOU
Genetic Testing Registry ENDOU
NextProtP21128 [Medical]
TSGene8909
GENETestsENDOU
Huge Navigator ENDOU [HugePedia]
snp3D : Map Gene to Disease8909
BioCentury BCIQENDOU
ClinGenENDOU
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8909
Chemical/Pharm GKB GenePA165512645
Clinical trialENDOU
Miscellaneous
canSAR (ICR)ENDOU (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineENDOU
EVEXENDOU
GoPubMedENDOU
iHOPENDOU
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:14:42 CEST 2017

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