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ENTHD2 (ENTH domain containing 2)

Identity

Other aliasC17orf56
HGNC (Hugo) ENTHD2
LocusID (NCBI) 146705
Atlas_Id 62840
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 79202077 and ends at 79212891 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ENTHD2   26458
Cards
Entrez_Gene (NCBI)ENTHD2  146705  ENTH domain containing 2
AliasesC17orf56
GeneCards (Weizmann)ENTHD2
Ensembl hg19 (Hinxton)ENSG00000167302 [Gene_View]  chr17:79202077-79212891 [Contig_View]  ENTHD2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167302 [Gene_View]  chr17:79202077-79212891 [Contig_View]  ENTHD2 [Vega]
ICGC DataPortalENSG00000167302
TCGA cBioPortalENTHD2
AceView (NCBI)ENTHD2
Genatlas (Paris)ENTHD2
WikiGenes146705
SOURCE (Princeton)ENTHD2
Genetics Home Reference (NIH)ENTHD2
Genomic and cartography
GoldenPath hg19 (UCSC)ENTHD2  -     chr17:79202077-79212891 -  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ENTHD2  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblENTHD2 - 17q25.3 [CytoView hg19]  ENTHD2 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIENTHD2 [Mapview hg19]  ENTHD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056090 AK127221 AK128728 BC037231 BC042155
RefSeq transcript (Entrez)NM_144679
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)ENTHD2
Cluster EST : UnigeneHs.631761 [ NCBI ]
CGAP (NCI)Hs.631761
Alternative Splicing GalleryENSG00000167302
Gene ExpressionENTHD2 [ NCBI-GEO ]   ENTHD2 [ EBI - ARRAY_EXPRESS ]   ENTHD2 [ SEEK ]   ENTHD2 [ MEM ]
Gene Expression Viewer (FireBrowse)ENTHD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146705
GTEX Portal (Tissue expression)ENTHD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N21
Splice isoforms : SwissVarQ96N21
PhosPhoSitePlusQ96N21
Domains : Interpro (EBI)ENTH    ENTH_VHS   
Domain families : Pfam (Sanger)ENTH (PF01417)   
Domain families : Pfam (NCBI)pfam01417   
Conserved Domain (NCBI)ENTHD2
DMDM Disease mutations146705
Blocks (Seattle)ENTHD2
SuperfamilyQ96N21
Human Protein AtlasENSG00000167302
Peptide AtlasQ96N21
HPRD08103
IPIIPI00043327   IPI00444617   
Protein Interaction databases
DIP (DOE-UCLA)Q96N21
IntAct (EBI)Q96N21
FunCoupENSG00000167302
BioGRIDENTHD2
STRING (EMBL)ENTHD2
ZODIACENTHD2
Ontologies - Pathways
QuickGOQ96N21
Ontology : AmiGOcytosol  cytoplasmic membrane-bounded vesicle  
Ontology : EGO-EBIcytosol  cytoplasmic membrane-bounded vesicle  
NDEx NetworkENTHD2
Atlas of Cancer Signalling NetworkENTHD2
Wikipedia pathwaysENTHD2
Orthology - Evolution
OrthoDB146705
GeneTree (enSembl)ENSG00000167302
Phylogenetic Trees/Animal Genes : TreeFamENTHD2
HOVERGENQ96N21
HOGENOMQ96N21
Homologs : HomoloGeneENTHD2
Homology/Alignments : Family Browser (UCSC)ENTHD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerENTHD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ENTHD2
dbVarENTHD2
ClinVarENTHD2
1000_GenomesENTHD2 
Exome Variant ServerENTHD2
ExAC (Exome Aggregation Consortium)ENTHD2 (select the gene name)
Genetic variants : HAPMAP146705
Genomic Variants (DGV)ENTHD2 [DGVbeta]
DECIPHER (Syndromes)17:79202077-79212891  ENSG00000167302
CONAN: Copy Number AnalysisENTHD2 
Mutations
ICGC Data PortalENTHD2 
TCGA Data PortalENTHD2 
Broad Tumor PortalENTHD2
OASIS PortalENTHD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICENTHD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDENTHD2
BioMutasearch ENTHD2
DgiDB (Drug Gene Interaction Database)ENTHD2
DoCM (Curated mutations)ENTHD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ENTHD2 (select a term)
intoGenENTHD2
Cancer3DENTHD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenENTHD2
Genetic Testing Registry ENTHD2
NextProtQ96N21 [Medical]
TSGene146705
GENETestsENTHD2
Huge Navigator ENTHD2 [HugePedia]
snp3D : Map Gene to Disease146705
BioCentury BCIQENTHD2
ClinGenENTHD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146705
Chemical/Pharm GKB GenePA142672239
Clinical trialENTHD2
Miscellaneous
canSAR (ICR)ENTHD2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineENTHD2
EVEXENTHD2
GoPubMedENTHD2
iHOPENTHD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:02:54 CET 2017

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