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ENTPD2 (ectonucleoside triphosphate diphosphohydrolase 2)

Identity

Alias_namesCD39L1
Alias_symbol (synonym)NTPDase-2
Other alias
HGNC (Hugo) ENTPD2
LocusID (NCBI) 954
Atlas_Id 55328
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137048099 and ends at 137054051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ENTPD2 (9q34.3) / C1S (12p13.31)ENTPD2 (9q34.3) / CLEC16A (16p13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ENTPD2   3364
Cards
Entrez_Gene (NCBI)ENTPD2  954  ectonucleoside triphosphate diphosphohydrolase 2
AliasesCD39L1; NTPDase-2
GeneCards (Weizmann)ENTPD2
Ensembl hg19 (Hinxton)ENSG00000054179 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000054179 [Gene_View]  chr9:137048099-137054051 [Contig_View]  ENTPD2 [Vega]
ICGC DataPortalENSG00000054179
TCGA cBioPortalENTPD2
AceView (NCBI)ENTPD2
Genatlas (Paris)ENTPD2
WikiGenes954
SOURCE (Princeton)ENTPD2
Genetics Home Reference (NIH)ENTPD2
Genomic and cartography
GoldenPath hg38 (UCSC)ENTPD2  -     chr9:137048099-137054051 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ENTPD2  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblENTPD2 - 9q34.3 [CytoView hg19]  ENTPD2 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIENTPD2 [Mapview hg19]  ENTPD2 [Mapview hg38]
OMIM602012   
Gene and transcription
Genbank (Entrez)AF144748 BC011003 BC035738 BQ883059 CB045339
RefSeq transcript (Entrez)NM_001246 NM_203468
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ENTPD2
Cluster EST : UnigeneHs.123036 [ NCBI ]
CGAP (NCI)Hs.123036
Alternative Splicing GalleryENSG00000054179
Gene ExpressionENTPD2 [ NCBI-GEO ]   ENTPD2 [ EBI - ARRAY_EXPRESS ]   ENTPD2 [ SEEK ]   ENTPD2 [ MEM ]
Gene Expression Viewer (FireBrowse)ENTPD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)954
GTEX Portal (Tissue expression)ENTPD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5L3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5L3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5L3
Splice isoforms : SwissVarQ9Y5L3
Catalytic activity : Enzyme3.6.1.- [ Enzyme-Expasy ]   3.6.1.-3.6.1.- [ IntEnz-EBI ]   3.6.1.- [ BRENDA ]   3.6.1.- [ KEGG ]   
PhosPhoSitePlusQ9Y5L3
Domaine pattern : Prosite (Expaxy)GDA1_CD39_NTPASE (PS01238)   
Domains : Interpro (EBI)GDA1_CD39_NTPase   
Domain families : Pfam (Sanger)GDA1_CD39 (PF01150)   
Domain families : Pfam (NCBI)pfam01150   
Conserved Domain (NCBI)ENTPD2
DMDM Disease mutations954
Blocks (Seattle)ENTPD2
SuperfamilyQ9Y5L3
Human Protein AtlasENSG00000054179
Peptide AtlasQ9Y5L3
HPRD03600
IPIIPI00001586   IPI00216370   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5L3
IntAct (EBI)Q9Y5L3
FunCoupENSG00000054179
BioGRIDENTPD2
STRING (EMBL)ENTPD2
ZODIACENTPD2
Ontologies - Pathways
QuickGOQ9Y5L3
Ontology : AmiGOATP binding  basal lamina  endoplasmic reticulum membrane  plasma membrane  G-protein coupled receptor signaling pathway  purine ribonucleoside diphosphate catabolic process  integral component of membrane  nucleoside-diphosphatase activity  nucleoside-triphosphatase activity  platelet activation  nucleobase-containing small molecule metabolic process  extracellular exosome  
Ontology : EGO-EBIATP binding  basal lamina  endoplasmic reticulum membrane  plasma membrane  G-protein coupled receptor signaling pathway  purine ribonucleoside diphosphate catabolic process  integral component of membrane  nucleoside-diphosphatase activity  nucleoside-triphosphatase activity  platelet activation  nucleobase-containing small molecule metabolic process  extracellular exosome  
Pathways : KEGGPurine metabolism   
NDEx NetworkENTPD2
Atlas of Cancer Signalling NetworkENTPD2
Wikipedia pathwaysENTPD2
Orthology - Evolution
OrthoDB954
GeneTree (enSembl)ENSG00000054179
Phylogenetic Trees/Animal Genes : TreeFamENTPD2
HOVERGENQ9Y5L3
HOGENOMQ9Y5L3
Homologs : HomoloGeneENTPD2
Homology/Alignments : Family Browser (UCSC)ENTPD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerENTPD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ENTPD2
dbVarENTPD2
ClinVarENTPD2
1000_GenomesENTPD2 
Exome Variant ServerENTPD2
ExAC (Exome Aggregation Consortium)ENTPD2 (select the gene name)
Genetic variants : HAPMAP954
Genomic Variants (DGV)ENTPD2 [DGVbeta]
DECIPHERENTPD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisENTPD2 
Mutations
ICGC Data PortalENTPD2 
TCGA Data PortalENTPD2 
Broad Tumor PortalENTPD2
OASIS PortalENTPD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICENTPD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDENTPD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ENTPD2
DgiDB (Drug Gene Interaction Database)ENTPD2
DoCM (Curated mutations)ENTPD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ENTPD2 (select a term)
intoGenENTPD2
Cancer3DENTPD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602012   
Orphanet
MedgenENTPD2
Genetic Testing Registry ENTPD2
NextProtQ9Y5L3 [Medical]
TSGene954
GENETestsENTPD2
Target ValidationENTPD2
Huge Navigator ENTPD2 [HugePedia]
snp3D : Map Gene to Disease954
BioCentury BCIQENTPD2
ClinGenENTPD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD954
Chemical/Pharm GKB GenePA27799
Clinical trialENTPD2
Miscellaneous
canSAR (ICR)ENTPD2 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineENTPD2
EVEXENTPD2
GoPubMedENTPD2
iHOPENTPD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:32:39 CEST 2017

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