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ENTPD3 (ectonucleoside triphosphate diphosphohydrolase 3)

Identity

Alias_namesCD39L3
Alias_symbol (synonym)NTPDase-3
HB6
Other alias
HGNC (Hugo) ENTPD3
LocusID (NCBI) 956
Atlas_Id 62843
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 40387156 and ends at 40428626 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ENTPD3   3365
Cards
Entrez_Gene (NCBI)ENTPD3  956  ectonucleoside triphosphate diphosphohydrolase 3
AliasesCD39L3; HB6; NTPDase-3
GeneCards (Weizmann)ENTPD3
Ensembl hg19 (Hinxton)ENSG00000168032 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168032 [Gene_View]  chr3:40387156-40428626 [Contig_View]  ENTPD3 [Vega]
ICGC DataPortalENSG00000168032
TCGA cBioPortalENTPD3
AceView (NCBI)ENTPD3
Genatlas (Paris)ENTPD3
WikiGenes956
SOURCE (Princeton)ENTPD3
Genetics Home Reference (NIH)ENTPD3
Genomic and cartography
GoldenPath hg38 (UCSC)ENTPD3  -     chr3:40387156-40428626 +  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ENTPD3  -     3p22.1   [Description]    (hg19-Feb_2009)
EnsemblENTPD3 - 3p22.1 [CytoView hg19]  ENTPD3 - 3p22.1 [CytoView hg38]
Mapping of homologs : NCBIENTPD3 [Mapview hg19]  ENTPD3 [Mapview hg38]
OMIM603161   
Gene and transcription
Genbank (Entrez)AF034840 AF039917 AK313322 BC029869 BX952692
RefSeq transcript (Entrez)NM_001248 NM_001291960 NM_001291961
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ENTPD3
Cluster EST : UnigeneHs.441145 [ NCBI ]
CGAP (NCI)Hs.441145
Alternative Splicing GalleryENSG00000168032
Gene ExpressionENTPD3 [ NCBI-GEO ]   ENTPD3 [ EBI - ARRAY_EXPRESS ]   ENTPD3 [ SEEK ]   ENTPD3 [ MEM ]
Gene Expression Viewer (FireBrowse)ENTPD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)956
GTEX Portal (Tissue expression)ENTPD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75355   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75355  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75355
Splice isoforms : SwissVarO75355
Catalytic activity : Enzyme3.6.1.5 [ Enzyme-Expasy ]   3.6.1.53.6.1.5 [ IntEnz-EBI ]   3.6.1.5 [ BRENDA ]   3.6.1.5 [ KEGG ]   
PhosPhoSitePlusO75355
Domaine pattern : Prosite (Expaxy)GDA1_CD39_NTPASE (PS01238)   
Domains : Interpro (EBI)GDA1_CD39_NTPase   
Domain families : Pfam (Sanger)GDA1_CD39 (PF01150)   
Domain families : Pfam (NCBI)pfam01150   
Conserved Domain (NCBI)ENTPD3
DMDM Disease mutations956
Blocks (Seattle)ENTPD3
SuperfamilyO75355
Human Protein AtlasENSG00000168032
Peptide AtlasO75355
HPRD16014
IPIIPI00025297   IPI00796818   IPI00925282   
Protein Interaction databases
DIP (DOE-UCLA)O75355
IntAct (EBI)O75355
FunCoupENSG00000168032
BioGRIDENTPD3
STRING (EMBL)ENTPD3
ZODIACENTPD3
Ontologies - Pathways
QuickGOO75355
Ontology : AmiGOprotein binding  ATP binding  plasma membrane  nucleoside diphosphate catabolic process  nucleoside triphosphate catabolic process  integral component of membrane  nucleoside-diphosphatase activity  nucleoside-triphosphatase activity  nucleobase-containing small molecule metabolic process  8-oxo-dGTP phosphohydrolase activity  
Ontology : EGO-EBIprotein binding  ATP binding  plasma membrane  nucleoside diphosphate catabolic process  nucleoside triphosphate catabolic process  integral component of membrane  nucleoside-diphosphatase activity  nucleoside-triphosphatase activity  nucleobase-containing small molecule metabolic process  8-oxo-dGTP phosphohydrolase activity  
Pathways : KEGGPurine metabolism    Pyrimidine metabolism    Epstein-Barr virus infection   
NDEx NetworkENTPD3
Atlas of Cancer Signalling NetworkENTPD3
Wikipedia pathwaysENTPD3
Orthology - Evolution
OrthoDB956
GeneTree (enSembl)ENSG00000168032
Phylogenetic Trees/Animal Genes : TreeFamENTPD3
HOVERGENO75355
HOGENOMO75355
Homologs : HomoloGeneENTPD3
Homology/Alignments : Family Browser (UCSC)ENTPD3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerENTPD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ENTPD3
dbVarENTPD3
ClinVarENTPD3
1000_GenomesENTPD3 
Exome Variant ServerENTPD3
ExAC (Exome Aggregation Consortium)ENTPD3 (select the gene name)
Genetic variants : HAPMAP956
Genomic Variants (DGV)ENTPD3 [DGVbeta]
DECIPHERENTPD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisENTPD3 
Mutations
ICGC Data PortalENTPD3 
TCGA Data PortalENTPD3 
Broad Tumor PortalENTPD3
OASIS PortalENTPD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICENTPD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDENTPD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ENTPD3
DgiDB (Drug Gene Interaction Database)ENTPD3
DoCM (Curated mutations)ENTPD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ENTPD3 (select a term)
intoGenENTPD3
Cancer3DENTPD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603161   
Orphanet
MedgenENTPD3
Genetic Testing Registry ENTPD3
NextProtO75355 [Medical]
TSGene956
GENETestsENTPD3
Target ValidationENTPD3
Huge Navigator ENTPD3 [HugePedia]
snp3D : Map Gene to Disease956
BioCentury BCIQENTPD3
ClinGenENTPD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD956
Chemical/Pharm GKB GenePA27800
Clinical trialENTPD3
Miscellaneous
canSAR (ICR)ENTPD3 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineENTPD3
EVEXENTPD3
GoPubMedENTPD3
iHOPENTPD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:07 CEST 2017

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