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EPB41 (erythrocyte membrane protein band 4.1)

Identity

Alias (NCBI)4.1R
EL1
HE
HGNC (Hugo) EPB41
HGNC Alias symb4.1R
HGNC Previous nameEL1
HGNC Previous nameelliptocytosis 1, RH-linked
LocusID (NCBI) 2035
Atlas_Id 46379
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 28887100 and ends at 29120041 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EPB41 (1p35.3)::EPB41 (1p35.3)EPB41 (1p35.3)::ITM2B (13q14.2)EPB41 (1p35.3)::ITPR1 (3p26.1)
EPB41 (1p35.3)::PIGV (1p36.11)EPB41 (1p35.3)::PRG2 (11q12.1)FKBP15 (9q32)::EPB41 (1p35.3)
KIAA1715 (2q31.1)::EPB41 (1p35.3)RPA2 (1p35.3)::EPB41 (1p35.3)SIPA1L1 (14q24.2)::EPB41 (1p35.3)
SIX2 (2p21)::EPB41 (1p35.3)SNRNP40 (1p35.2)::EPB41 (1p35.3)EPB41 1p35.3::ITPR1 3p26.1
EPB41 1p35.3::PIGV 1p36.11SNRNP40 1p35.2::EPB41 1p35.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)EPB41   3377
Cards
Entrez_Gene (NCBI)EPB41    erythrocyte membrane protein band 4.1
Aliases4.1R; EL1; HE
GeneCards (Weizmann)EPB41
Ensembl hg19 (Hinxton)ENSG00000159023 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159023 [Gene_View]  ENSG00000159023 [Sequence]  chr1:28887100-29120041 [Contig_View]  EPB41 [Vega]
ICGC DataPortalENSG00000159023
TCGA cBioPortalEPB41
AceView (NCBI)EPB41
Genatlas (Paris)EPB41
SOURCE (Princeton)EPB41
Genetics Home Reference (NIH)EPB41
Genomic and cartography
GoldenPath hg38 (UCSC)EPB41  -     chr1:28887100-29120041 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPB41  -     1p35.3   [Description]    (hg19-Feb_2009)
GoldenPathEPB41 - 1p35.3 [CytoView hg19]  EPB41 - 1p35.3 [CytoView hg38]
ImmunoBaseENSG00000159023
Genome Data Viewer NCBIEPB41 [Mapview hg19]  
OMIM130500   611804   
Gene and transcription
Genbank (Entrez)AB209649 AF156225 AI076831 AI819579 AK299093
RefSeq transcript (Entrez)NM_001166005 NM_001166006 NM_001166007 NM_001376013 NM_001376014 NM_001376015 NM_001376016 NM_001376017 NM_001376018 NM_001376019 NM_001376020 NM_001376021 NM_001376022 NM_001376023 NM_001376024 NM_001376025 NM_001376026 NM_001376027 NM_001376028 NM_004437 NM_203342 NM_203343
Consensus coding sequences : CCDS (NCBI)EPB41
Gene ExpressionEPB41 [ NCBI-GEO ]   EPB41 [ EBI - ARRAY_EXPRESS ]   EPB41 [ SEEK ]   EPB41 [ MEM ]
Gene Expression Viewer (FireBrowse)EPB41 [ Firebrowse - Broad ]
GenevisibleExpression of EPB41 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2035
GTEX Portal (Tissue expression)EPB41
Human Protein AtlasENSG00000159023-EPB41 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPB41
Human Protein Atlas [tissue]ENSG00000159023-EPB41 [tissue]
HPRD00558
Protein Interaction databases
BioGRIDEPB41
STRING (EMBL)EPB41
ZODIACEPB41
Ontologies - Pathways
Litterature
PubMed152 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXEPB41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:32:15 CET 2022

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