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EPC1 (enhancer of polycomb homolog 1)

Identity

Alias (NCBI)Epl1
HGNC (Hugo) EPC1
HGNC Alias symbEpl1
HGNC Previous nameenhancer of polycomb homolog 1 (Drosophila)
LocusID (NCBI) 80314
Atlas_Id 42977
Location 10p11.22  [Link to chromosome band 10p11]
Location_base_pair Starts at 32267716 and ends at 32347158 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BMPR2 (2q33.1) / EPC1 (10p11.22)DDX24 (14q32.12) / EPC1 (10p11.22)EPC1 (10p11.22) / ASXL2 (2p23.3)
EPC1 (10p11.22) / BMPR2 (2q33.1)EPC1 (10p11.22) / PHF1 (6p21.32)EPC1 (10p11.22) / PTGR2 (14q24.3)
EPC1 (10p11.22) / RBM47 (4p14)EPC1 (10p11.22) / SNX5 (20p11.23)EPC1 (10p11.22) / ZEB1 (10p11.22)
LGALS4 (19q13.2) / EPC1 (10p11.22)EPC1 10p11.22 / PHF1 6p21.32EPC1 10p11.22 / PTGR2 14q24.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(2;8)(p23;p11) KAT6A/ASXL2
t(2;10)(p23;p11) EPC1/ASXL2

External links

Nomenclature
HGNC (Hugo)EPC1   19876
Cards
Entrez_Gene (NCBI)EPC1    enhancer of polycomb homolog 1
AliasesEpl1
GeneCards (Weizmann)EPC1
Ensembl hg19 (Hinxton)ENSG00000120616 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120616 [Gene_View]  ENSG00000120616 [Sequence]  chr10:32267716-32347158 [Contig_View]  EPC1 [Vega]
ICGC DataPortalENSG00000120616
TCGA cBioPortalEPC1
AceView (NCBI)EPC1
Genatlas (Paris)EPC1
SOURCE (Princeton)EPC1
Genetics Home Reference (NIH)EPC1
Genomic and cartography
GoldenPath hg38 (UCSC)EPC1  -     chr10:32267716-32347158 -  10p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPC1  -     10p11.22   [Description]    (hg19-Feb_2009)
GoldenPathEPC1 - 10p11.22 [CytoView hg19]  EPC1 - 10p11.22 [CytoView hg38]
ImmunoBaseENSG00000120616
genome Data Viewer NCBIEPC1 [Mapview hg19]  
OMIM610999   
Gene and transcription
Genbank (Entrez)AA553969 AF277374 AF286905 AK024329 AK092304
RefSeq transcript (Entrez)NM_001272004 NM_001272019 NM_001282391 NM_001382753 NM_001382754 NM_001382755 NM_001382756 NM_025209
Consensus coding sequences : CCDS (NCBI)EPC1
Alternative Splicing GalleryENSG00000120616
Gene ExpressionEPC1 [ NCBI-GEO ]   EPC1 [ EBI - ARRAY_EXPRESS ]   EPC1 [ SEEK ]   EPC1 [ MEM ]
Gene Expression Viewer (FireBrowse)EPC1 [ Firebrowse - Broad ]
GenevisibleExpression of EPC1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80314
GTEX Portal (Tissue expression)EPC1
Human Protein AtlasENSG00000120616-EPC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPC1
Human Protein Atlas [tissue]ENSG00000120616-EPC1 [tissue]
HPRD09941
Protein Interaction databases
BioGRIDEPC1
STRING (EMBL)EPC1
ZODIACEPC1
Ontologies - Pathways
Litterature
PubMed58 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXEPC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Sep 15 22:12:46 CEST 2021
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