Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EPGN (epithelial mitogen)

Identity

Alias_namesepithelial mitogen homolog (mouse)
Alias_symbol (synonym)epigen
EPG
PRO9904
ALGV3072
Other alias
HGNC (Hugo) EPGN
LocusID (NCBI) 255324
Atlas_Id 49907
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 74308470 and ends at 74316803 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPGN   17470
Cards
Entrez_Gene (NCBI)EPGN  255324  epithelial mitogen
AliasesALGV3072; EPG; PRO9904
GeneCards (Weizmann)EPGN
Ensembl hg19 (Hinxton)ENSG00000182585 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182585 [Gene_View]  chr4:74308470-74316803 [Contig_View]  EPGN [Vega]
ICGC DataPortalENSG00000182585
TCGA cBioPortalEPGN
AceView (NCBI)EPGN
Genatlas (Paris)EPGN
WikiGenes255324
SOURCE (Princeton)EPGN
Genetics Home Reference (NIH)EPGN
Genomic and cartography
GoldenPath hg38 (UCSC)EPGN  -     chr4:74308470-74316803 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPGN  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblEPGN - 4q13.3 [CytoView hg19]  EPGN - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBIEPGN [Mapview hg19]  EPGN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK289455 AY358920 BC127938 BC127939 BC140431
RefSeq transcript (Entrez)NM_001013442 NM_001270989 NM_001270990 NM_001270991 NM_001270992 NM_001270993
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EPGN
Cluster EST : UnigeneHs.401237 [ NCBI ]
CGAP (NCI)Hs.401237
Alternative Splicing GalleryENSG00000182585
Gene ExpressionEPGN [ NCBI-GEO ]   EPGN [ EBI - ARRAY_EXPRESS ]   EPGN [ SEEK ]   EPGN [ MEM ]
Gene Expression Viewer (FireBrowse)EPGN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)255324
GTEX Portal (Tissue expression)EPGN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UW88   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UW88  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UW88
Splice isoforms : SwissVarQ6UW88
PhosPhoSitePlusQ6UW88
Domaine pattern : Prosite (Expaxy)EGF_1 (PS00022)    EGF_2 (PS01186)    EGF_3 (PS50026)   
Domains : Interpro (EBI)EGF-like_CS    EGF-like_dom    EGF_rcpt_ligand   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPGN
DMDM Disease mutations255324
Blocks (Seattle)EPGN
SuperfamilyQ6UW88
Human Protein AtlasENSG00000182585
Peptide AtlasQ6UW88
HPRD10866
IPIIPI00419598   IPI00923513   IPI00815684   IPI00923445   IPI00923464   IPI00923402   IPI00827963   IPI00966437   IPI00964038   
Protein Interaction databases
DIP (DOE-UCLA)Q6UW88
IntAct (EBI)Q6UW88
FunCoupENSG00000182585
BioGRIDEPGN
STRING (EMBL)EPGN
ZODIACEPGN
Ontologies - Pathways
QuickGOQ6UW88
Ontology : AmiGOMAPK cascade  activation of MAPK activity  angiogenesis  epidermal growth factor receptor binding  extracellular space  intracellular  integral component of plasma membrane  growth factor activity  positive regulation of cell proliferation  positive regulation of MAP kinase activity  positive regulation of epidermal growth factor-activated receptor activity  positive regulation of mitotic nuclear division  positive regulation of epithelial cell proliferation  
Ontology : EGO-EBIMAPK cascade  activation of MAPK activity  angiogenesis  epidermal growth factor receptor binding  extracellular space  intracellular  integral component of plasma membrane  growth factor activity  positive regulation of cell proliferation  positive regulation of MAP kinase activity  positive regulation of epidermal growth factor-activated receptor activity  positive regulation of mitotic nuclear division  positive regulation of epithelial cell proliferation  
NDEx NetworkEPGN
Atlas of Cancer Signalling NetworkEPGN
Wikipedia pathwaysEPGN
Orthology - Evolution
OrthoDB255324
GeneTree (enSembl)ENSG00000182585
Phylogenetic Trees/Animal Genes : TreeFamEPGN
HOVERGENQ6UW88
HOGENOMQ6UW88
Homologs : HomoloGeneEPGN
Homology/Alignments : Family Browser (UCSC)EPGN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEPGN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EPGN
dbVarEPGN
ClinVarEPGN
1000_GenomesEPGN 
Exome Variant ServerEPGN
ExAC (Exome Aggregation Consortium)EPGN (select the gene name)
Genetic variants : HAPMAP255324
Genomic Variants (DGV)EPGN [DGVbeta]
DECIPHEREPGN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEPGN 
Mutations
ICGC Data PortalEPGN 
TCGA Data PortalEPGN 
Broad Tumor PortalEPGN
OASIS PortalEPGN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEPGN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEPGN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EPGN
DgiDB (Drug Gene Interaction Database)EPGN
DoCM (Curated mutations)EPGN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EPGN (select a term)
intoGenEPGN
Cancer3DEPGN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEPGN
Genetic Testing Registry EPGN
NextProtQ6UW88 [Medical]
TSGene255324
GENETestsEPGN
Target ValidationEPGN
Huge Navigator EPGN [HugePedia]
snp3D : Map Gene to Disease255324
BioCentury BCIQEPGN
ClinGenEPGN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255324
Chemical/Pharm GKB GenePA162385143
Clinical trialEPGN
Miscellaneous
canSAR (ICR)EPGN (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPGN
EVEXEPGN
GoPubMedEPGN
iHOPEPGN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:00:30 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.