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EPHX4 (epoxide hydrolase 4)

Identity

Alias_namesABHD7
abhydrolase domain containing 7
Alias_symbol (synonym)EPHXRP
FLJ90341
Other aliasEH4
HGNC (Hugo) EPHX4
LocusID (NCBI) 253152
Atlas_Id 62862
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 92495533 and ends at 92529093 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPHX4   23758
Cards
Entrez_Gene (NCBI)EPHX4  253152  epoxide hydrolase 4
AliasesABHD7; EH4; EPHXRP
GeneCards (Weizmann)EPHX4
Ensembl hg19 (Hinxton)ENSG00000172031 [Gene_View]  chr1:92495533-92529093 [Contig_View]  EPHX4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000172031 [Gene_View]  chr1:92495533-92529093 [Contig_View]  EPHX4 [Vega]
ICGC DataPortalENSG00000172031
TCGA cBioPortalEPHX4
AceView (NCBI)EPHX4
Genatlas (Paris)EPHX4
WikiGenes253152
SOURCE (Princeton)EPHX4
Genetics Home Reference (NIH)EPHX4
Genomic and cartography
GoldenPath hg19 (UCSC)EPHX4  -     chr1:92495533-92529093 +  1p22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EPHX4  -     1p22.1   [Description]    (hg38-Dec_2013)
EnsemblEPHX4 - 1p22.1 [CytoView hg19]  EPHX4 - 1p22.1 [CytoView hg38]
Mapping of homologs : NCBIEPHX4 [Mapview hg19]  EPHX4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074822 BC041475 DB475492 HQ448639
RefSeq transcript (Entrez)NM_173567
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)EPHX4
Cluster EST : UnigeneHs.201555 [ NCBI ]
CGAP (NCI)Hs.201555
Alternative Splicing GalleryENSG00000172031
Gene ExpressionEPHX4 [ NCBI-GEO ]   EPHX4 [ EBI - ARRAY_EXPRESS ]   EPHX4 [ SEEK ]   EPHX4 [ MEM ]
Gene Expression Viewer (FireBrowse)EPHX4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)253152
GTEX Portal (Tissue expression)EPHX4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IUS5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IUS5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IUS5
Splice isoforms : SwissVarQ8IUS5
Catalytic activity : Enzyme3.3.-.- [ Enzyme-Expasy ]   3.3.-.-3.3.-.- [ IntEnz-EBI ]   3.3.-.- [ BRENDA ]   3.3.-.- [ KEGG ]   
PhosPhoSitePlusQ8IUS5
Domains : Interpro (EBI)AB_hydrolase    AB_hydrolase_1    Epox_hydrolase-like   
Domain families : Pfam (Sanger)Abhydrolase_6 (PF12697)   
Domain families : Pfam (NCBI)pfam12697   
Conserved Domain (NCBI)EPHX4
DMDM Disease mutations253152
Blocks (Seattle)EPHX4
SuperfamilyQ8IUS5
Human Protein AtlasENSG00000172031
Peptide AtlasQ8IUS5
HPRD12408
IPIIPI00292692   
Protein Interaction databases
DIP (DOE-UCLA)Q8IUS5
IntAct (EBI)Q8IUS5
FunCoupENSG00000172031
BioGRIDEPHX4
STRING (EMBL)EPHX4
ZODIACEPHX4
Ontologies - Pathways
QuickGOQ8IUS5
Ontology : AmiGOmetabolic process  integral component of membrane  hydrolase activity  
Ontology : EGO-EBImetabolic process  integral component of membrane  hydrolase activity  
NDEx NetworkEPHX4
Atlas of Cancer Signalling NetworkEPHX4
Wikipedia pathwaysEPHX4
Orthology - Evolution
OrthoDB253152
GeneTree (enSembl)ENSG00000172031
Phylogenetic Trees/Animal Genes : TreeFamEPHX4
HOVERGENQ8IUS5
HOGENOMQ8IUS5
Homologs : HomoloGeneEPHX4
Homology/Alignments : Family Browser (UCSC)EPHX4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEPHX4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EPHX4
dbVarEPHX4
ClinVarEPHX4
1000_GenomesEPHX4 
Exome Variant ServerEPHX4
ExAC (Exome Aggregation Consortium)EPHX4 (select the gene name)
Genetic variants : HAPMAP253152
Genomic Variants (DGV)EPHX4 [DGVbeta]
DECIPHER (Syndromes)1:92495533-92529093  ENSG00000172031
CONAN: Copy Number AnalysisEPHX4 
Mutations
ICGC Data PortalEPHX4 
TCGA Data PortalEPHX4 
Broad Tumor PortalEPHX4
OASIS PortalEPHX4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEPHX4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEPHX4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EPHX4
DgiDB (Drug Gene Interaction Database)EPHX4
DoCM (Curated mutations)EPHX4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EPHX4 (select a term)
intoGenEPHX4
Cancer3DEPHX4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEPHX4
Genetic Testing Registry EPHX4
NextProtQ8IUS5 [Medical]
TSGene253152
GENETestsEPHX4
Huge Navigator EPHX4 [HugePedia]
snp3D : Map Gene to Disease253152
BioCentury BCIQEPHX4
ClinGenEPHX4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD253152
Chemical/Pharm GKB GenePA164719207
Clinical trialEPHX4
Miscellaneous
canSAR (ICR)EPHX4 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPHX4
EVEXEPHX4
GoPubMedEPHX4
iHOPEPHX4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:02:59 CET 2017

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