Atlas of Genetics and Cytogenetics in Oncology and Haematology


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EPN2-AS1 (EPN2 antisense RNA 1)

Identity

Alias_namesEPN2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) EPN2-AS1
LocusID (NCBI) 100874018
Atlas_Id 62865
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 19296596 and ends at 19306261 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPN2-AS1   40849
Cards
Entrez_Gene (NCBI)EPN2-AS1  100874018  EPN2 antisense RNA 1
Aliases
GeneCards (Weizmann)EPN2-AS1
Ensembl hg19 (Hinxton)ENSG00000235397 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235397 [Gene_View]  chr17:19296596-19306261 [Contig_View]  EPN2-AS1 [Vega]
ICGC DataPortalENSG00000235397
TCGA cBioPortalEPN2-AS1
AceView (NCBI)EPN2-AS1
Genatlas (Paris)EPN2-AS1
WikiGenes100874018
SOURCE (Princeton)EPN2-AS1
Genetics Home Reference (NIH)EPN2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)EPN2-AS1  -     chr17:19296596-19306261 -  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPN2-AS1  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblEPN2-AS1 - 17p11.2 [CytoView hg19]  EPN2-AS1 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBIEPN2-AS1 [Mapview hg19]  EPN2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037786 BG705989 CV325757
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EPN2-AS1
Cluster EST : UnigeneHs.621672 [ NCBI ]
CGAP (NCI)Hs.621672
Alternative Splicing GalleryENSG00000235397
Gene ExpressionEPN2-AS1 [ NCBI-GEO ]   EPN2-AS1 [ EBI - ARRAY_EXPRESS ]   EPN2-AS1 [ SEEK ]   EPN2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)EPN2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874018
GTEX Portal (Tissue expression)EPN2-AS1
Human Protein AtlasENSG00000235397-EPN2-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPN2-AS1
DMDM Disease mutations100874018
Blocks (Seattle)EPN2-AS1
Human Protein Atlas [tissue]ENSG00000235397-EPN2-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000235397
BioGRIDEPN2-AS1
STRING (EMBL)EPN2-AS1
ZODIACEPN2-AS1
Ontologies - Pathways
Huge Navigator EPN2-AS1 [HugePedia]
snp3D : Map Gene to Disease100874018
BioCentury BCIQEPN2-AS1
ClinGenEPN2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874018
Clinical trialEPN2-AS1
Miscellaneous
canSAR (ICR)EPN2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPN2-AS1
EVEXEPN2-AS1
GoPubMedEPN2-AS1
iHOPEPN2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:20 CET 2017

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