Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EPOR (erythropoietin receptor)

Identity

Other namesEPO-R
HGNC (Hugo) EPOR
LocusID (NCBI) 2057
Location 19p13.2
Location_base_pair Starts at 11487881 and ends at 11495018 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EPOR   3416
Cards
Entrez_Gene (NCBI)EPOR  2057  erythropoietin receptor
GeneCards (Weizmann)EPOR
Ensembl (Hinxton)ENSG00000187266 [Gene_View]  chr19:11487881-11495018 [Contig_View]  EPOR [Vega]
AceView (NCBI)EPOR
Genatlas (Paris)EPOR
WikiGenes2057
SOURCE (Princeton)NM_000121
Genomic and cartography
GoldenPath (UCSC)EPOR  -  19p13.2   chr19:11487881-11495018 -  19p13.2   [Description]    (hg19-Feb_2009)
EnsemblEPOR - 19p13.2 [CytoView]
Mapping of homologs : NCBIEPOR [Mapview]
OMIM133100   133171   
Gene and transcription
Genbank (Entrez)AK315097 BC019092 BC112153 BC143697 BC143698
RefSeq transcript (Entrez)NM_000121
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_021395 NT_011295 NW_001838483 NW_004929414
Consensus coding sequences : CCDS (NCBI)EPOR
Cluster EST : UnigeneHs.631624 [ NCBI ]
CGAP (NCI)Hs.631624
Alternative Splicing : Fast-db (Paris)GSHG0015513
Alternative Splicing GalleryENSG00000187266
Gene ExpressionEPOR [ NCBI-GEO ]     EPOR [ SEEK ]   EPOR [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP19235 (Uniprot)
NextProtP19235  [Medical]
With graphics : InterProP19235
Splice isoforms : SwissVarP19235 (Swissvar)
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_L_F1 (PS01352)   
Domains : Interpro (EBI)Erythropoietin_rcpt    Fibronectin_type3    Growth/epo_recpt_lig-bind    Ig-like_fold    Long_hematopoietin_rcpt_CS   
Related proteins : CluSTrP19235
Domain families : Pfam (Sanger)EpoR_lig-bind (PF09067)    fn3 (PF00041)   
Domain families : Pfam (NCBI)pfam09067    pfam00041   
Domain families : Smart (EMBL)FN3 (SM00060)  
DMDM Disease mutations2057
Blocks (Seattle)P19235
PDB (SRS)1CN4    1EBA    1EBP    1EER    1ERN    2JIX   
PDB (PDBSum)1CN4    1EBA    1EBP    1EER    1ERN    2JIX   
PDB (IMB)1CN4    1EBA    1EBP    1EER    1ERN    2JIX   
PDB (RSDB)1CN4    1EBA    1EBP    1EER    1ERN    2JIX   
Human Protein AtlasENSG00000187266
Peptide AtlasP19235
HPRD00587
IPIIPI00017476   IPI00401740   IPI00401741   IPI00744260   
Protein Interaction databases
DIP (DOE-UCLA)P19235
IntAct (EBI)P19235
FunCoupENSG00000187266
BioGRIDEPOR
InParanoidP19235
Interologous Interaction database P19235
IntegromeDBEPOR
STRING (EMBL)EPOR
Ontologies - Pathways
Ontology : AmiGOerythropoietin receptor activity  protein binding  extracellular region  integral to plasma membrane  signal transduction  brain development  heart development  embryo development  erythropoietin-mediated signaling pathway  erythropoietin-mediated signaling pathway  identical protein binding  decidualization  
Ontology : EGO-EBIerythropoietin receptor activity  protein binding  extracellular region  integral to plasma membrane  signal transduction  brain development  heart development  embryo development  erythropoietin-mediated signaling pathway  erythropoietin-mediated signaling pathway  identical protein binding  decidualization  
Pathways : BIOCARTAErythropoietin mediated neuroprotection through NF-kB [Genes]    EPO Signaling Pathway [Genes]   
Pathways : KEGGCytokine-cytokine receptor interaction    PI3K-Akt signaling pathway    Jak-STAT signaling pathway    Hematopoietic cell lineage   
REACTOMEEPOR
Protein Interaction DatabaseEPOR
Wikipedia pathwaysEPOR
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)EPOR
SNP (GeneSNP Utah)EPOR
SNP : HGBaseEPOR
Genetic variants : HAPMAPEPOR
1000_GenomesEPOR 
ICGC programENSG00000187266 
Somatic Mutations in Cancer : COSMICEPOR 
CONAN: Copy Number AnalysisEPOR 
Mutations and Diseases : HGMDEPOR
OMIM133100    133171   
GENETestsEPOR
Disease Genetic AssociationEPOR
Huge Navigator EPOR [HugePedia]  EPOR [HugeCancerGEM]
Genomic VariantsEPOR  EPOR [DGVbeta]
Exome VariantEPOR
dbVarEPOR
ClinVarEPOR
snp3D : Map Gene to Disease2057
General knowledge
Homologs : HomoloGeneEPOR
Homology/Alignments : Family Browser (UCSC)EPOR
Phylogenetic Trees/Animal Genes : TreeFamEPOR
Chemical/Protein Interactions : CTD2057
Chemical/Pharm GKB GenePA27834
Clinical trialEPOR
Cancer Resource (Charite)ENSG00000187266
Other databases
Probes
Litterature
PubMed189 Pubmed reference(s) in Entrez
CoreMineEPOR
iHOPEPOR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 17:05:05 CEST 2014

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.