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EPPIN-WFDC6 (EPPIN-WFDC6 readthrough)

Identity

Alias_namesSPINLW1-WFDC6
SPINLW1-WFDC6 readthrough
Other alias
HGNC (Hugo) EPPIN-WFDC6
LocusID (NCBI) 100526773
Atlas_Id 62868
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45536280 and ends at 45547426 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPPIN-WFDC6   38825
Cards
Entrez_Gene (NCBI)EPPIN-WFDC6  100526773  EPPIN-WFDC6 readthrough
AliasesSPINLW1-WFDC6
GeneCards (Weizmann)EPPIN-WFDC6
Ensembl hg19 (Hinxton)ENSG00000249139 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249139 [Gene_View]  chr20:45536280-45547426 [Contig_View]  EPPIN-WFDC6 [Vega]
ICGC DataPortalENSG00000249139
TCGA cBioPortalEPPIN-WFDC6
AceView (NCBI)EPPIN-WFDC6
Genatlas (Paris)EPPIN-WFDC6
WikiGenes100526773
SOURCE (Princeton)EPPIN-WFDC6
Genetics Home Reference (NIH)EPPIN-WFDC6
Genomic and cartography
GoldenPath hg38 (UCSC)EPPIN-WFDC6  -     chr20:45536280-45547426 -  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPPIN-WFDC6  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblEPPIN-WFDC6 - 20q13.12 [CytoView hg19]  EPPIN-WFDC6 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIEPPIN-WFDC6 [Mapview hg19]  EPPIN-WFDC6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA626362 AK301937
RefSeq transcript (Entrez)NM_001198986
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EPPIN-WFDC6
Cluster EST : UnigeneHs.274876 [ NCBI ]
CGAP (NCI)Hs.274876
Alternative Splicing GalleryENSG00000249139
Gene ExpressionEPPIN-WFDC6 [ NCBI-GEO ]   EPPIN-WFDC6 [ EBI - ARRAY_EXPRESS ]   EPPIN-WFDC6 [ SEEK ]   EPPIN-WFDC6 [ MEM ]
Gene Expression Viewer (FireBrowse)EPPIN-WFDC6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526773
GTEX Portal (Tissue expression)EPPIN-WFDC6
Human Protein AtlasENSG00000249139-EPPIN-WFDC6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPPIN-WFDC6
DMDM Disease mutations100526773
Blocks (Seattle)EPPIN-WFDC6
Human Protein Atlas [tissue]ENSG00000249139-EPPIN-WFDC6 [tissue]
Protein Interaction databases
FunCoupENSG00000249139
BioGRIDEPPIN-WFDC6
STRING (EMBL)EPPIN-WFDC6
ZODIACEPPIN-WFDC6
Ontologies - Pathways
Huge Navigator EPPIN-WFDC6 [HugePedia]
snp3D : Map Gene to Disease100526773
BioCentury BCIQEPPIN-WFDC6
ClinGenEPPIN-WFDC6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526773
Clinical trialEPPIN-WFDC6
Miscellaneous
canSAR (ICR)EPPIN-WFDC6 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPPIN-WFDC6
EVEXEPPIN-WFDC6
GoPubMedEPPIN-WFDC6
iHOPEPPIN-WFDC6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:41:27 CET 2017

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