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EPS8L3 (EPS8-like 3)

Identity

Alias_namesEPS8-like 3
Alias_symbol (synonym)FLJ21522
MGC16817
Other aliasEPS8R3
HGNC (Hugo) EPS8L3
LocusID (NCBI) 79574
Atlas_Id 62873
Location 1p13.3  [Link to chromosome band 1p13]
Location_base_pair Starts at 110292702 and ends at 110306644 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPS8L3   21297
Cards
Entrez_Gene (NCBI)EPS8L3  79574  EPS8-like 3
AliasesEPS8R3
GeneCards (Weizmann)EPS8L3
Ensembl hg19 (Hinxton)ENSG00000198758 [Gene_View]  chr1:110292702-110306644 [Contig_View]  EPS8L3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000198758 [Gene_View]  chr1:110292702-110306644 [Contig_View]  EPS8L3 [Vega]
ICGC DataPortalENSG00000198758
TCGA cBioPortalEPS8L3
AceView (NCBI)EPS8L3
Genatlas (Paris)EPS8L3
WikiGenes79574
SOURCE (Princeton)EPS8L3
Genetics Home Reference (NIH)EPS8L3
Genomic and cartography
GoldenPath hg19 (UCSC)EPS8L3  -     chr1:110292702-110306644 -  1p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EPS8L3  -     1p13.3   [Description]    (hg38-Dec_2013)
EnsemblEPS8L3 - 1p13.3 [CytoView hg19]  EPS8L3 - 1p13.3 [CytoView hg38]
Mapping of homologs : NCBIEPS8L3 [Mapview hg19]  EPS8L3 [Mapview hg38]
OMIM614989   
Gene and transcription
Genbank (Entrez)AK025175 AK225235 AK290261 AK292198 AK307932
RefSeq transcript (Entrez)NM_024526 NM_133181 NM_139053
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)EPS8L3
Cluster EST : UnigeneHs.485352 [ NCBI ]
CGAP (NCI)Hs.485352
Alternative Splicing GalleryENSG00000198758
Gene ExpressionEPS8L3 [ NCBI-GEO ]   EPS8L3 [ EBI - ARRAY_EXPRESS ]   EPS8L3 [ SEEK ]   EPS8L3 [ MEM ]
Gene Expression Viewer (FireBrowse)EPS8L3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79574
GTEX Portal (Tissue expression)EPS8L3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TE67   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TE67  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TE67
Splice isoforms : SwissVarQ8TE67
PhosPhoSitePlusQ8TE67
Domaine pattern : Prosite (Expaxy)SH3 (PS50002)   
Domains : Interpro (EBI)PTB    SH3_domain   
Domain families : Pfam (Sanger)PTB (PF08416)    SH3_1 (PF00018)   
Domain families : Pfam (NCBI)pfam08416    pfam00018   
Domain families : Smart (EMBL)SH3 (SM00326)  
Conserved Domain (NCBI)EPS8L3
DMDM Disease mutations79574
Blocks (Seattle)EPS8L3
PDB (SRS)1WXT   
PDB (PDBSum)1WXT   
PDB (IMB)1WXT   
PDB (RSDB)1WXT   
Structural Biology KnowledgeBase1WXT   
SCOP (Structural Classification of Proteins)1WXT   
CATH (Classification of proteins structures)1WXT   
SuperfamilyQ8TE67
Human Protein AtlasENSG00000198758
Peptide AtlasQ8TE67
HPRD13277
IPIIPI00181833   IPI00302864   IPI00256752   
Protein Interaction databases
DIP (DOE-UCLA)Q8TE67
IntAct (EBI)Q8TE67
FunCoupENSG00000198758
BioGRIDEPS8L3
STRING (EMBL)EPS8L3
ZODIACEPS8L3
Ontologies - Pathways
QuickGOQ8TE67
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkEPS8L3
Atlas of Cancer Signalling NetworkEPS8L3
Wikipedia pathwaysEPS8L3
Orthology - Evolution
OrthoDB79574
GeneTree (enSembl)ENSG00000198758
Phylogenetic Trees/Animal Genes : TreeFamEPS8L3
HOVERGENQ8TE67
HOGENOMQ8TE67
Homologs : HomoloGeneEPS8L3
Homology/Alignments : Family Browser (UCSC)EPS8L3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEPS8L3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EPS8L3
dbVarEPS8L3
ClinVarEPS8L3
1000_GenomesEPS8L3 
Exome Variant ServerEPS8L3
ExAC (Exome Aggregation Consortium)EPS8L3 (select the gene name)
Genetic variants : HAPMAP79574
Genomic Variants (DGV)EPS8L3 [DGVbeta]
DECIPHER (Syndromes)1:110292702-110306644  ENSG00000198758
CONAN: Copy Number AnalysisEPS8L3 
Mutations
ICGC Data PortalEPS8L3 
TCGA Data PortalEPS8L3 
Broad Tumor PortalEPS8L3
OASIS PortalEPS8L3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEPS8L3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEPS8L3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EPS8L3
DgiDB (Drug Gene Interaction Database)EPS8L3
DoCM (Curated mutations)EPS8L3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EPS8L3 (select a term)
intoGenEPS8L3
Cancer3DEPS8L3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614989   
Orphanet8577   
MedgenEPS8L3
Genetic Testing Registry EPS8L3
NextProtQ8TE67 [Medical]
TSGene79574
GENETestsEPS8L3
Huge Navigator EPS8L3 [HugePedia]
snp3D : Map Gene to Disease79574
BioCentury BCIQEPS8L3
ClinGenEPS8L3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79574
Chemical/Pharm GKB GenePA134940846
Clinical trialEPS8L3
Miscellaneous
canSAR (ICR)EPS8L3 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPS8L3
EVEXEPS8L3
GoPubMedEPS8L3
iHOPEPS8L3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:01 CET 2017

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