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EPSTI1 (epithelial stromal interaction 1)

Identity

Alias_namesepithelial stromal interaction 1 (breast)
Alias_symbol (synonym)BRESI1
MGC29634
Other alias
HGNC (Hugo) EPSTI1
LocusID (NCBI) 94240
Atlas_Id 40477
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 42886388 and ends at 42992312 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CTDSP2 (12q14.1) / EPSTI1 (13q14.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EPSTI1   16465
Cards
Entrez_Gene (NCBI)EPSTI1  94240  epithelial stromal interaction 1
AliasesBRESI1
GeneCards (Weizmann)EPSTI1
Ensembl hg19 (Hinxton)ENSG00000133106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133106 [Gene_View]  chr13:42886388-42992312 [Contig_View]  EPSTI1 [Vega]
ICGC DataPortalENSG00000133106
TCGA cBioPortalEPSTI1
AceView (NCBI)EPSTI1
Genatlas (Paris)EPSTI1
WikiGenes94240
SOURCE (Princeton)EPSTI1
Genetics Home Reference (NIH)EPSTI1
Genomic and cartography
GoldenPath hg38 (UCSC)EPSTI1  -     chr13:42886388-42992312 -  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EPSTI1  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblEPSTI1 - 13q14.11 [CytoView hg19]  EPSTI1 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBIEPSTI1 [Mapview hg19]  EPSTI1 [Mapview hg38]
OMIM607441   
Gene and transcription
Genbank (Entrez)AA372477 AF396928 AK292461 AK313877 AL831953
RefSeq transcript (Entrez)NM_001002264 NM_001330543 NM_001331228 NM_033255
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EPSTI1
Cluster EST : UnigeneHs.546467 [ NCBI ]
CGAP (NCI)Hs.546467
Alternative Splicing GalleryENSG00000133106
Gene ExpressionEPSTI1 [ NCBI-GEO ]   EPSTI1 [ EBI - ARRAY_EXPRESS ]   EPSTI1 [ SEEK ]   EPSTI1 [ MEM ]
Gene Expression Viewer (FireBrowse)EPSTI1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)94240
GTEX Portal (Tissue expression)EPSTI1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96J88   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96J88  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96J88
Splice isoforms : SwissVarQ96J88
PhosPhoSitePlusQ96J88
Domains : Interpro (EBI)EPSTI1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EPSTI1
DMDM Disease mutations94240
Blocks (Seattle)EPSTI1
SuperfamilyQ96J88
Human Protein AtlasENSG00000133106
Peptide AtlasQ96J88
HPRD06309
IPIIPI00878914   IPI00063925   IPI00216980   IPI01013076   IPI01011615   
Protein Interaction databases
DIP (DOE-UCLA)Q96J88
IntAct (EBI)Q96J88
FunCoupENSG00000133106
BioGRIDEPSTI1
STRING (EMBL)EPSTI1
ZODIACEPSTI1
Ontologies - Pathways
QuickGOQ96J88
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkEPSTI1
Atlas of Cancer Signalling NetworkEPSTI1
Wikipedia pathwaysEPSTI1
Orthology - Evolution
OrthoDB94240
GeneTree (enSembl)ENSG00000133106
Phylogenetic Trees/Animal Genes : TreeFamEPSTI1
HOVERGENQ96J88
HOGENOMQ96J88
Homologs : HomoloGeneEPSTI1
Homology/Alignments : Family Browser (UCSC)EPSTI1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEPSTI1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EPSTI1
dbVarEPSTI1
ClinVarEPSTI1
1000_GenomesEPSTI1 
Exome Variant ServerEPSTI1
ExAC (Exome Aggregation Consortium)EPSTI1 (select the gene name)
Genetic variants : HAPMAP94240
Genomic Variants (DGV)EPSTI1 [DGVbeta]
DECIPHEREPSTI1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEPSTI1 
Mutations
ICGC Data PortalEPSTI1 
TCGA Data PortalEPSTI1 
Broad Tumor PortalEPSTI1
OASIS PortalEPSTI1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEPSTI1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEPSTI1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EPSTI1
DgiDB (Drug Gene Interaction Database)EPSTI1
DoCM (Curated mutations)EPSTI1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EPSTI1 (select a term)
intoGenEPSTI1
Cancer3DEPSTI1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607441   
Orphanet
MedgenEPSTI1
Genetic Testing Registry EPSTI1
NextProtQ96J88 [Medical]
TSGene94240
GENETestsEPSTI1
Target ValidationEPSTI1
Huge Navigator EPSTI1 [HugePedia]
snp3D : Map Gene to Disease94240
BioCentury BCIQEPSTI1
ClinGenEPSTI1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94240
Chemical/Pharm GKB GenePA27840
Clinical trialEPSTI1
Miscellaneous
canSAR (ICR)EPSTI1 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEPSTI1
EVEXEPSTI1
GoPubMedEPSTI1
iHOPEPSTI1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:00:32 CEST 2017

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