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ERAL1 (Era-like 12S mitochondrial rRNA chaperone 1)

Identity

Alias_namesEra (E. coli G-protein homolog)-like 1
Era G-protein-like 1 (E. coli)
Era-like 12S mitochondrial rRNA chaperone 1
Alias_symbol (synonym)HERA-B
Other aliasERA
ERAL1A
H-ERA
HERA-A
HGNC (Hugo) ERAL1
LocusID (NCBI) 26284
Atlas_Id 62878
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 27182043 and ends at 27188072 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ERAL1 (17q11.2) / DIDO1 (20q13.33)ERAL1 (17q11.2) / ERAL1 (17q11.2)ERAL1 (17q11.2) / TMEM131 (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERAL1   3424
Cards
Entrez_Gene (NCBI)ERAL1  26284  Era-like 12S mitochondrial rRNA chaperone 1
AliasesERA; ERAL1A; H-ERA; HERA-A; 
HERA-B
GeneCards (Weizmann)ERAL1
Ensembl hg19 (Hinxton)ENSG00000132591 [Gene_View]  chr17:27182043-27188072 [Contig_View]  ERAL1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000132591 [Gene_View]  chr17:27182043-27188072 [Contig_View]  ERAL1 [Vega]
ICGC DataPortalENSG00000132591
TCGA cBioPortalERAL1
AceView (NCBI)ERAL1
Genatlas (Paris)ERAL1
WikiGenes26284
SOURCE (Princeton)ERAL1
Genetics Home Reference (NIH)ERAL1
Genomic and cartography
GoldenPath hg19 (UCSC)ERAL1  -     chr17:27182043-27188072 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ERAL1  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblERAL1 - 17q11.2 [CytoView hg19]  ERAL1 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIERAL1 [Mapview hg19]  ERAL1 [Mapview hg38]
OMIM607435   
Gene and transcription
Genbank (Entrez)AB049388 AF082657 AF082658 AK023342 AY007435
RefSeq transcript (Entrez)NM_005702
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)ERAL1
Cluster EST : UnigeneHs.3426 [ NCBI ]
CGAP (NCI)Hs.3426
Alternative Splicing GalleryENSG00000132591
Gene ExpressionERAL1 [ NCBI-GEO ]   ERAL1 [ EBI - ARRAY_EXPRESS ]   ERAL1 [ SEEK ]   ERAL1 [ MEM ]
Gene Expression Viewer (FireBrowse)ERAL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26284
GTEX Portal (Tissue expression)ERAL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75616   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75616  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75616
Splice isoforms : SwissVarO75616
PhosPhoSitePlusO75616
Domaine pattern : Prosite (Expaxy)G_ERA (PS51713)   
Domains : Interpro (EBI)G_ERA_dom    GTP-bd_Era    GTP_binding_domain    KH_dom-like_a/b    KH_prok-type    P-loop_NTPase    Small_GTP-bd_dom   
Domain families : Pfam (Sanger)MMR_HSR1 (PF01926)   
Domain families : Pfam (NCBI)pfam01926   
Conserved Domain (NCBI)ERAL1
DMDM Disease mutations26284
Blocks (Seattle)ERAL1
SuperfamilyO75616
Human Protein AtlasENSG00000132591
Peptide AtlasO75616
HPRD08466
IPIIPI00026512   IPI00216548   IPI00795864   
Protein Interaction databases
DIP (DOE-UCLA)O75616
IntAct (EBI)O75616
FunCoupENSG00000132591
BioGRIDERAL1
STRING (EMBL)ERAL1
ZODIACERAL1
Ontologies - Pathways
QuickGOO75616
Ontology : AmiGOribosomal small subunit assembly  protein binding  GTP binding  cytoplasm  mitochondrion  mitochondrial inner membrane  mitochondrial matrix  actin cytoskeleton  rRNA binding  ribosomal small subunit binding  poly(A) RNA binding  intermediate filament cytoskeleton  
Ontology : EGO-EBIribosomal small subunit assembly  protein binding  GTP binding  cytoplasm  mitochondrion  mitochondrial inner membrane  mitochondrial matrix  actin cytoskeleton  rRNA binding  ribosomal small subunit binding  poly(A) RNA binding  intermediate filament cytoskeleton  
NDEx NetworkERAL1
Atlas of Cancer Signalling NetworkERAL1
Wikipedia pathwaysERAL1
Orthology - Evolution
OrthoDB26284
GeneTree (enSembl)ENSG00000132591
Phylogenetic Trees/Animal Genes : TreeFamERAL1
HOVERGENO75616
HOGENOMO75616
Homologs : HomoloGeneERAL1
Homology/Alignments : Family Browser (UCSC)ERAL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERAL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERAL1
dbVarERAL1
ClinVarERAL1
1000_GenomesERAL1 
Exome Variant ServerERAL1
ExAC (Exome Aggregation Consortium)ERAL1 (select the gene name)
Genetic variants : HAPMAP26284
Genomic Variants (DGV)ERAL1 [DGVbeta]
DECIPHER (Syndromes)17:27182043-27188072  ENSG00000132591
CONAN: Copy Number AnalysisERAL1 
Mutations
ICGC Data PortalERAL1 
TCGA Data PortalERAL1 
Broad Tumor PortalERAL1
OASIS PortalERAL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICERAL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDERAL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ERAL1
DgiDB (Drug Gene Interaction Database)ERAL1
DoCM (Curated mutations)ERAL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERAL1 (select a term)
intoGenERAL1
Cancer3DERAL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607435   
Orphanet
MedgenERAL1
Genetic Testing Registry ERAL1
NextProtO75616 [Medical]
TSGene26284
GENETestsERAL1
Huge Navigator ERAL1 [HugePedia]
snp3D : Map Gene to Disease26284
BioCentury BCIQERAL1
ClinGenERAL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26284
Chemical/Pharm GKB GenePA27843
Clinical trialERAL1
Miscellaneous
canSAR (ICR)ERAL1 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERAL1
EVEXERAL1
GoPubMedERAL1
iHOPERAL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:01 CET 2017

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