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ERCC6L2 (excision repair cross-complementation group 6 like 2)

Identity

Alias_namesC9orf102
chromosome 9 open reading frame 102
excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2
excision repair cross-complementation group 6 like 2
Alias_symbol (synonym)FLJ37706
RAD26L
Other aliasBMFS2
SR278
HGNC (Hugo) ERCC6L2
LocusID (NCBI) 375748
Atlas_Id 41176
Location 9q22.32  [Link to chromosome band 9q22]
Location_base_pair Starts at 98637900 and ends at 98731122 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DHCR24 (1p32.3) / ERCC6L2 (9q22.32)ERCC6L2 (9q22.32) / ABCC3 (17q21.33)ERCC6L2 (9q22.32) / GTF3C4 (9q34.13)
ERCC6L2 (9q22.32) / IPPK (9q22.31)TTC6 (14q21.1) / ERCC6L2 (9q22.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERCC6L2   26922
Cards
Entrez_Gene (NCBI)ERCC6L2  375748  excision repair cross-complementation group 6 like 2
AliasesBMFS2; C9orf102; RAD26L; SR278
GeneCards (Weizmann)ERCC6L2
Ensembl hg19 (Hinxton)ENSG00000182150 [Gene_View]  chr9:98637900-98731122 [Contig_View]  ERCC6L2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000182150 [Gene_View]  chr9:98637900-98731122 [Contig_View]  ERCC6L2 [Vega]
ICGC DataPortalENSG00000182150
TCGA cBioPortalERCC6L2
AceView (NCBI)ERCC6L2
Genatlas (Paris)ERCC6L2
WikiGenes375748
SOURCE (Princeton)ERCC6L2
Genetics Home Reference (NIH)ERCC6L2
Genomic and cartography
GoldenPath hg19 (UCSC)ERCC6L2  -     chr9:98637900-98731122 +  9q22.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ERCC6L2  -     9q22.32   [Description]    (hg38-Dec_2013)
EnsemblERCC6L2 - 9q22.32 [CytoView hg19]  ERCC6L2 - 9q22.32 [CytoView hg38]
Mapping of homologs : NCBIERCC6L2 [Mapview hg19]  ERCC6L2 [Mapview hg38]
OMIM615667   615715   
Gene and transcription
Genbank (Entrez)AK095025 AK307504 AK308131 AK308409 AL133663
RefSeq transcript (Entrez)NM_001010895 NM_001034155 NM_020207
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_034107 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)ERCC6L2
Cluster EST : UnigeneHs.732570 [ NCBI ]
CGAP (NCI)Hs.732570
Alternative Splicing GalleryENSG00000182150
Gene ExpressionERCC6L2 [ NCBI-GEO ]   ERCC6L2 [ EBI - ARRAY_EXPRESS ]   ERCC6L2 [ SEEK ]   ERCC6L2 [ MEM ]
Gene Expression Viewer (FireBrowse)ERCC6L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375748
GTEX Portal (Tissue expression)ERCC6L2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERCC6L2
DMDM Disease mutations375748
Blocks (Seattle)ERCC6L2
Human Protein AtlasENSG00000182150
HPRD17362
IPIIPI00395940   IPI00873984   IPI00641648   IPI00903093   IPI00827832   
Protein Interaction databases
FunCoupENSG00000182150
BioGRIDERCC6L2
STRING (EMBL)ERCC6L2
ZODIACERCC6L2
Ontologies - Pathways
Huge Navigator ERCC6L2 [HugePedia]
snp3D : Map Gene to Disease375748
BioCentury BCIQERCC6L2
ClinGenERCC6L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375748
Chemical/Pharm GKB GenePA134961240
Clinical trialERCC6L2
Miscellaneous
canSAR (ICR)ERCC6L2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERCC6L2
EVEXERCC6L2
GoPubMedERCC6L2
iHOPERCC6L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:00:17 CEST 2017

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