Atlas of Genetics and Cytogenetics in Oncology and Haematology


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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret jlhuret@AtlasGeneticsOncology.org
Donations are also welcome
If each casual visitor gives 3 Euros or Dollars, the Atlas is saved in a week !
If each professional gives 100 Euros or Dollars once a year (now), the Atlas is saved in 2 weeks !
Don't let the Atlas imminent demise
Note: we send fiscal receipts for donations equal or above 50 Euros or Dollars

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ERH (enhancer of rudimentary homolog (Drosophila))

Identity

Other namesDROER
HGNC (Hugo) ERH
LocusID (NCBI) 2079
Location 14q24.1
Location_base_pair Starts at 69846840 and ends at 69865021 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ERH   3447
Cards
Entrez_Gene (NCBI)ERH  2079  enhancer of rudimentary homolog (Drosophila)
GeneCards (Weizmann)ERH
Ensembl hg19 (Hinxton) [Gene_View]  chr14:69846840-69865021 [Contig_View]  ERH [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:69846840-69865021 [Contig_View]  ERH [Vega]
cBioPortalERH
AceView (NCBI)ERH
Genatlas (Paris)ERH
WikiGenes2079
SOURCE (Princeton)ERH
Genomic and cartography
GoldenPath hg19 (UCSC)ERH  -     chr14:69846840-69865021 -  14q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ERH  -     14q24.1   [Description]    (hg38-Dec_2013)
EnsemblERH - 14q24.1 [CytoView hg19]  ERH - 14q24.1 [CytoView hg38]
Mapping of homologs : NCBIERH [Mapview hg19]  ERH [Mapview hg38]
OMIM601191   
Gene and transcription
Genbank (Entrez)AK130850 AK312186 BC014301 BC071709 BT006877
RefSeq transcript (Entrez)NM_004450
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)ERH
Cluster EST : UnigeneHs.509791 [ NCBI ]
CGAP (NCI)Hs.509791
Alternative Splicing : Fast-db (Paris)GSHG0009450
Gene ExpressionERH [ NCBI-GEO ]     ERH [ SEEK ]   ERH [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP84090 (Uniprot)
NextProtP84090  [Medical]
With graphics : InterProP84090
Splice isoforms : SwissVarP84090 (Swissvar)
Domaine pattern : Prosite (Expaxy)ER (PS01290)   
Domains : Interpro (EBI)Enh_rudimentary   
Related proteins : CluSTrP84090
Domain families : Pfam (Sanger)ER (PF01133)   
Domain families : Pfam (NCBI)pfam01133   
Domain structure : Prodom (Prabi Lyon)Enh_rudimentary (PD008105)   
DMDM Disease mutations2079
Blocks (Seattle)P84090
PDB (SRS)1W9G    2NML   
PDB (PDBSum)1W9G    2NML   
PDB (IMB)1W9G    2NML   
PDB (RSDB)1W9G    2NML   
Peptide AtlasP84090
HPRD09026
IPIIPI00029631   IPI01025098   
Protein Interaction databases
DIP (DOE-UCLA)P84090
IntAct (EBI)P84090
BioGRIDERH
IntegromeDBERH
STRING (EMBL)ERH
Ontologies - Pathways
QuickGOP84090
Ontology : AmiGOosteoblast differentiation  protein binding  nucleobase-containing compound metabolic process  pyrimidine nucleoside metabolic process  cell cycle  membrane  midbody  poly(A) RNA binding  
Ontology : EGO-EBIosteoblast differentiation  protein binding  nucleobase-containing compound metabolic process  pyrimidine nucleoside metabolic process  cell cycle  membrane  midbody  poly(A) RNA binding  
Protein Interaction DatabaseERH
DoCM (Curated mutations)ERH
Wikipedia pathwaysERH
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerERH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERH
dbVarERH
ClinVarERH
1000_GenomesERH 
Exome Variant ServerERH
SNP (GeneSNP Utah)ERH
SNP : HGBaseERH
Genetic variants : HAPMAPERH
Genomic Variants (DGV)ERH [DGVbeta]
Mutations
Somatic Mutations in Cancer : COSMICERH 
CONAN: Copy Number AnalysisERH 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)14:69846840-69865021
Mutations and Diseases : HGMDERH
OMIM601191   
MedgenERH
NextProtP84090 [Medical]
GENETestsERH
Disease Genetic AssociationERH
Huge Navigator ERH [HugePedia]  ERH [HugeCancerGEM]
snp3D : Map Gene to Disease2079
DGIdb (Drug Gene Interaction db)ERH
General knowledge
Homologs : HomoloGeneERH
Homology/Alignments : Family Browser (UCSC)ERH
Phylogenetic Trees/Animal Genes : TreeFamERH
Chemical/Protein Interactions : CTD2079
Chemical/Pharm GKB GenePA27859
Clinical trialERH
Other databases
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
CoreMineERH
GoPubMedERH
iHOPERH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Mar 28 15:18:38 CET 2015

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For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.