Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ERICH1 (glutamate rich 1)

Identity

Alias_namesglutamate-rich 1
Other aliasHSPC319
HGNC (Hugo) ERICH1
LocusID (NCBI) 157697
Atlas_Id 62884
Location 8p23.3  [Link to chromosome band 8p23]
Location_base_pair Starts at 614737 and ends at 731239 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ERICH1 (8p23.3) / ERICH1 (8p23.3)ERICH1 (8p23.3) / GABRA3 (Xq28)ERICH1 (8p23.3) / PCM1 (8p22)
LOC100505761 () / ERICH1 (8p23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERICH1   27234
Cards
Entrez_Gene (NCBI)ERICH1  157697  glutamate rich 1
AliasesHSPC319
GeneCards (Weizmann)ERICH1
Ensembl hg19 (Hinxton)ENSG00000104714 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104714 [Gene_View]  chr8:614737-731239 [Contig_View]  ERICH1 [Vega]
ICGC DataPortalENSG00000104714
TCGA cBioPortalERICH1
AceView (NCBI)ERICH1
Genatlas (Paris)ERICH1
WikiGenes157697
SOURCE (Princeton)ERICH1
Genetics Home Reference (NIH)ERICH1
Genomic and cartography
GoldenPath hg38 (UCSC)ERICH1  -     chr8:614737-731239 -  8p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERICH1  -     8p23.3   [Description]    (hg19-Feb_2009)
EnsemblERICH1 - 8p23.3 [CytoView hg19]  ERICH1 - 8p23.3 [CytoView hg38]
Mapping of homologs : NCBIERICH1 [Mapview hg19]  ERICH1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA427571 AF161437 AK055649 AK090404 AK125470
RefSeq transcript (Entrez)NM_001303100 NM_207332
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187572
Consensus coding sequences : CCDS (NCBI)ERICH1
Cluster EST : UnigeneHs.662526 [ NCBI ]
CGAP (NCI)Hs.662526
Alternative Splicing GalleryENSG00000104714
Gene ExpressionERICH1 [ NCBI-GEO ]   ERICH1 [ EBI - ARRAY_EXPRESS ]   ERICH1 [ SEEK ]   ERICH1 [ MEM ]
Gene Expression Viewer (FireBrowse)ERICH1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157697
GTEX Portal (Tissue expression)ERICH1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86X53   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86X53  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86X53
Splice isoforms : SwissVarQ86X53
PhosPhoSitePlusQ86X53
Domains : Interpro (EBI)ERICH1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERICH1
DMDM Disease mutations157697
Blocks (Seattle)ERICH1
SuperfamilyQ86X53
Human Protein AtlasENSG00000104714
Peptide AtlasQ86X53
HPRD14105
IPIIPI00329142   IPI01015058   IPI00975723   IPI00974015   IPI00985273   IPI00976517   
Protein Interaction databases
DIP (DOE-UCLA)Q86X53
IntAct (EBI)Q86X53
FunCoupENSG00000104714
BioGRIDERICH1
STRING (EMBL)ERICH1
ZODIACERICH1
Ontologies - Pathways
QuickGOQ86X53
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkERICH1
Atlas of Cancer Signalling NetworkERICH1
Wikipedia pathwaysERICH1
Orthology - Evolution
OrthoDB157697
GeneTree (enSembl)ENSG00000104714
Phylogenetic Trees/Animal Genes : TreeFamERICH1
HOVERGENQ86X53
HOGENOMQ86X53
Homologs : HomoloGeneERICH1
Homology/Alignments : Family Browser (UCSC)ERICH1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERICH1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERICH1
dbVarERICH1
ClinVarERICH1
1000_GenomesERICH1 
Exome Variant ServerERICH1
ExAC (Exome Aggregation Consortium)ERICH1 (select the gene name)
Genetic variants : HAPMAP157697
Genomic Variants (DGV)ERICH1 [DGVbeta]
DECIPHERERICH1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERICH1 
Mutations
ICGC Data PortalERICH1 
TCGA Data PortalERICH1 
Broad Tumor PortalERICH1
OASIS PortalERICH1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICERICH1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDERICH1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ERICH1
DgiDB (Drug Gene Interaction Database)ERICH1
DoCM (Curated mutations)ERICH1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERICH1 (select a term)
intoGenERICH1
Cancer3DERICH1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenERICH1
Genetic Testing Registry ERICH1
NextProtQ86X53 [Medical]
TSGene157697
GENETestsERICH1
Target ValidationERICH1
Huge Navigator ERICH1 [HugePedia]
snp3D : Map Gene to Disease157697
BioCentury BCIQERICH1
ClinGenERICH1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD157697
Chemical/Pharm GKB GenePA142671903
Clinical trialERICH1
Miscellaneous
canSAR (ICR)ERICH1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERICH1
EVEXERICH1
GoPubMedERICH1
iHOPERICH1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:07:13 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.