Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ERICH2 (glutamate rich 2)

Identity

Alias_namesglutamate-rich 2
Other alias-
HGNC (Hugo) ERICH2
LocusID (NCBI) 285141
Atlas_Id 62886
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 170783786 and ends at 170798971 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERICH2   44395
Cards
Entrez_Gene (NCBI)ERICH2  285141  glutamate rich 2
Aliases
GeneCards (Weizmann)ERICH2
Ensembl hg19 (Hinxton)ENSG00000204334 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204334 [Gene_View]  chr2:170783786-170798971 [Contig_View]  ERICH2 [Vega]
ICGC DataPortalENSG00000204334
TCGA cBioPortalERICH2
AceView (NCBI)ERICH2
Genatlas (Paris)ERICH2
WikiGenes285141
SOURCE (Princeton)ERICH2
Genetics Home Reference (NIH)ERICH2
Genomic and cartography
GoldenPath hg38 (UCSC)ERICH2  -     chr2:170783786-170798971 +  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERICH2  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblERICH2 - 2q31.1 [CytoView hg19]  ERICH2 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIERICH2 [Mapview hg19]  ERICH2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA401652 BC127676 BC150546 BG215457 BQ269226
RefSeq transcript (Entrez)NM_001289947 NM_001290030 NM_001290031
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERICH2
Cluster EST : UnigeneHs.567958 [ NCBI ]
CGAP (NCI)Hs.567958
Alternative Splicing GalleryENSG00000204334
Gene ExpressionERICH2 [ NCBI-GEO ]   ERICH2 [ EBI - ARRAY_EXPRESS ]   ERICH2 [ SEEK ]   ERICH2 [ MEM ]
Gene Expression Viewer (FireBrowse)ERICH2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285141
GTEX Portal (Tissue expression)ERICH2
Human Protein AtlasENSG00000204334-ERICH2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L162   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L162  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L162
Splice isoforms : SwissVarA1L162
PhosPhoSitePlusA1L162
Domains : Interpro (EBI)ERICH2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERICH2
DMDM Disease mutations285141
Blocks (Seattle)ERICH2
SuperfamilyA1L162
Human Protein Atlas [tissue]ENSG00000204334-ERICH2 [tissue]
Peptide AtlasA1L162
IPIIPI01011080   
Protein Interaction databases
DIP (DOE-UCLA)A1L162
IntAct (EBI)A1L162
FunCoupENSG00000204334
BioGRIDERICH2
STRING (EMBL)ERICH2
ZODIACERICH2
Ontologies - Pathways
QuickGOA1L162
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkERICH2
Atlas of Cancer Signalling NetworkERICH2
Wikipedia pathwaysERICH2
Orthology - Evolution
OrthoDB285141
GeneTree (enSembl)ENSG00000204334
Phylogenetic Trees/Animal Genes : TreeFamERICH2
HOVERGENA1L162
HOGENOMA1L162
Homologs : HomoloGeneERICH2
Homology/Alignments : Family Browser (UCSC)ERICH2
Gene fusions - Rearrangements
Tumor Fusion PortalERICH2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERICH2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERICH2
dbVarERICH2
ClinVarERICH2
1000_GenomesERICH2 
Exome Variant ServerERICH2
ExAC (Exome Aggregation Consortium)ENSG00000204334
GNOMAD BrowserENSG00000204334
Genetic variants : HAPMAP285141
Genomic Variants (DGV)ERICH2 [DGVbeta]
DECIPHERERICH2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERICH2 
Mutations
ICGC Data PortalERICH2 
TCGA Data PortalERICH2 
Broad Tumor PortalERICH2
OASIS PortalERICH2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDERICH2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ERICH2
DgiDB (Drug Gene Interaction Database)ERICH2
DoCM (Curated mutations)ERICH2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERICH2 (select a term)
intoGenERICH2
Cancer3DERICH2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETERICH2
MedgenERICH2
Genetic Testing Registry ERICH2
NextProtA1L162 [Medical]
TSGene285141
GENETestsERICH2
Target ValidationERICH2
Huge Navigator ERICH2 [HugePedia]
snp3D : Map Gene to Disease285141
BioCentury BCIQERICH2
ClinGenERICH2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285141
Chemical/Pharm GKB GenePA166049123
Clinical trialERICH2
Miscellaneous
canSAR (ICR)ERICH2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERICH2
EVEXERICH2
GoPubMedERICH2
iHOPERICH2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:04:27 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.