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ERICH5 (glutamate-rich 5)

Identity

Alias_namesC8orf47
chromosome 8 open reading frame 47
glutamate-rich 5
Alias_symbol (synonym)FLJ39553
Other alias
HGNC (Hugo) ERICH5
LocusID (NCBI) 203111
Atlas_Id 62890
Location 8q22.2  [Link to chromosome band 8q22]
Location_base_pair Starts at 99076750 and ends at 99105838 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CPQ (8q22.1) / ERICH5 (8q22.2)GML (8q24.3) / ERICH5 (8q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERICH5   26823
Cards
Entrez_Gene (NCBI)ERICH5  203111  glutamate-rich 5
AliasesC8orf47
GeneCards (Weizmann)ERICH5
Ensembl hg19 (Hinxton)ENSG00000177459 [Gene_View]  chr8:99076750-99105838 [Contig_View]  ERICH5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000177459 [Gene_View]  chr8:99076750-99105838 [Contig_View]  ERICH5 [Vega]
ICGC DataPortalENSG00000177459
TCGA cBioPortalERICH5
AceView (NCBI)ERICH5
Genatlas (Paris)ERICH5
WikiGenes203111
SOURCE (Princeton)ERICH5
Genetics Home Reference (NIH)ERICH5
Genomic and cartography
GoldenPath hg19 (UCSC)ERICH5  -     chr8:99076750-99105838 +  8q22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ERICH5  -     8q22.2   [Description]    (hg38-Dec_2013)
EnsemblERICH5 - 8q22.2 [CytoView hg19]  ERICH5 - 8q22.2 [CytoView hg38]
Mapping of homologs : NCBIERICH5 [Mapview hg19]  ERICH5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI697720 AK096872 BC062359
RefSeq transcript (Entrez)NM_001170806 NM_173549
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)ERICH5
Cluster EST : UnigeneHs.171455 [ NCBI ]
CGAP (NCI)Hs.171455
Alternative Splicing GalleryENSG00000177459
Gene ExpressionERICH5 [ NCBI-GEO ]   ERICH5 [ EBI - ARRAY_EXPRESS ]   ERICH5 [ SEEK ]   ERICH5 [ MEM ]
Gene Expression Viewer (FireBrowse)ERICH5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)203111
GTEX Portal (Tissue expression)ERICH5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P6B1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P6B1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P6B1
Splice isoforms : SwissVarQ6P6B1
PhosPhoSitePlusQ6P6B1
Domains : Interpro (EBI)DUF4573   
Domain families : Pfam (Sanger)DUF4573 (PF15140)   
Domain families : Pfam (NCBI)pfam15140   
Conserved Domain (NCBI)ERICH5
DMDM Disease mutations203111
Blocks (Seattle)ERICH5
SuperfamilyQ6P6B1
Human Protein AtlasENSG00000177459
Peptide AtlasQ6P6B1
HPRD08802
IPIIPI00295855   IPI00796328   
Protein Interaction databases
DIP (DOE-UCLA)Q6P6B1
IntAct (EBI)Q6P6B1
FunCoupENSG00000177459
BioGRIDERICH5
STRING (EMBL)ERICH5
ZODIACERICH5
Ontologies - Pathways
QuickGOQ6P6B1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkERICH5
Atlas of Cancer Signalling NetworkERICH5
Wikipedia pathwaysERICH5
Orthology - Evolution
OrthoDB203111
GeneTree (enSembl)ENSG00000177459
Phylogenetic Trees/Animal Genes : TreeFamERICH5
HOVERGENQ6P6B1
HOGENOMQ6P6B1
Homologs : HomoloGeneERICH5
Homology/Alignments : Family Browser (UCSC)ERICH5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERICH5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERICH5
dbVarERICH5
ClinVarERICH5
1000_GenomesERICH5 
Exome Variant ServerERICH5
ExAC (Exome Aggregation Consortium)ERICH5 (select the gene name)
Genetic variants : HAPMAP203111
Genomic Variants (DGV)ERICH5 [DGVbeta]
DECIPHER (Syndromes)8:99076750-99105838  ENSG00000177459
CONAN: Copy Number AnalysisERICH5 
Mutations
ICGC Data PortalERICH5 
TCGA Data PortalERICH5 
Broad Tumor PortalERICH5
OASIS PortalERICH5 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDERICH5
BioMutasearch ERICH5
DgiDB (Drug Gene Interaction Database)ERICH5
DoCM (Curated mutations)ERICH5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERICH5 (select a term)
intoGenERICH5
Cancer3DERICH5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenERICH5
Genetic Testing Registry ERICH5
NextProtQ6P6B1 [Medical]
TSGene203111
GENETestsERICH5
Huge Navigator ERICH5 [HugePedia]
snp3D : Map Gene to Disease203111
BioCentury BCIQERICH5
ClinGenERICH5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD203111
Chemical/Pharm GKB GenePA142672366
Clinical trialERICH5
Miscellaneous
canSAR (ICR)ERICH5 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERICH5
EVEXERICH5
GoPubMedERICH5
iHOPERICH5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:04 CET 2017

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