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ERICH6B (glutamate rich 6B)

Identity

Alias_namesFAM194B
family with sequence similarity 194, member B
glutamate-rich 6B
Alias_symbol (synonym)FLJ32682
Other alias
HGNC (Hugo) ERICH6B
LocusID (NCBI) 220081
Atlas_Id 62893
Location 13q14.13  [Link to chromosome band 13q14]
Location_base_pair Starts at 45541297 and ends at 45615739 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERICH6B   26523
Cards
Entrez_Gene (NCBI)ERICH6B  220081  glutamate rich 6B
AliasesFAM194B
GeneCards (Weizmann)ERICH6B
Ensembl hg19 (Hinxton)ENSG00000165837 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165837 [Gene_View]  chr13:45541297-45615739 [Contig_View]  ERICH6B [Vega]
ICGC DataPortalENSG00000165837
TCGA cBioPortalERICH6B
AceView (NCBI)ERICH6B
Genatlas (Paris)ERICH6B
WikiGenes220081
SOURCE (Princeton)ERICH6B
Genetics Home Reference (NIH)ERICH6B
Genomic and cartography
GoldenPath hg38 (UCSC)ERICH6B  -     chr13:45541297-45615739 -  13q14.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERICH6B  -     13q14.13   [Description]    (hg19-Feb_2009)
EnsemblERICH6B - 13q14.13 [CytoView hg19]  ERICH6B - 13q14.13 [CytoView hg38]
Mapping of homologs : NCBIERICH6B [Mapview hg19]  ERICH6B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057244 BC131494
RefSeq transcript (Entrez)NM_182542
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERICH6B
Cluster EST : UnigeneHs.668747 [ NCBI ]
CGAP (NCI)Hs.668747
Alternative Splicing GalleryENSG00000165837
Gene ExpressionERICH6B [ NCBI-GEO ]   ERICH6B [ EBI - ARRAY_EXPRESS ]   ERICH6B [ SEEK ]   ERICH6B [ MEM ]
Gene Expression Viewer (FireBrowse)ERICH6B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)220081
GTEX Portal (Tissue expression)ERICH6B
Human Protein AtlasENSG00000165837-ERICH6B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5W0A0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5W0A0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5W0A0
Splice isoforms : SwissVarQ5W0A0
PhosPhoSitePlusQ5W0A0
Domains : Interpro (EBI)FAM194   
Domain families : Pfam (Sanger)FAM194 (PF14977)   
Domain families : Pfam (NCBI)pfam14977   
Conserved Domain (NCBI)ERICH6B
DMDM Disease mutations220081
Blocks (Seattle)ERICH6B
SuperfamilyQ5W0A0
Human Protein Atlas [tissue]ENSG00000165837-ERICH6B [tissue]
Peptide AtlasQ5W0A0
HPRD08729
IPIIPI00065457   IPI00887167   
Protein Interaction databases
DIP (DOE-UCLA)Q5W0A0
IntAct (EBI)Q5W0A0
FunCoupENSG00000165837
BioGRIDERICH6B
STRING (EMBL)ERICH6B
ZODIACERICH6B
Ontologies - Pathways
QuickGOQ5W0A0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkERICH6B
Atlas of Cancer Signalling NetworkERICH6B
Wikipedia pathwaysERICH6B
Orthology - Evolution
OrthoDB220081
GeneTree (enSembl)ENSG00000165837
Phylogenetic Trees/Animal Genes : TreeFamERICH6B
HOVERGENQ5W0A0
HOGENOMQ5W0A0
Homologs : HomoloGeneERICH6B
Homology/Alignments : Family Browser (UCSC)ERICH6B
Gene fusions - Rearrangements
Tumor Fusion PortalERICH6B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERICH6B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERICH6B
dbVarERICH6B
ClinVarERICH6B
1000_GenomesERICH6B 
Exome Variant ServerERICH6B
ExAC (Exome Aggregation Consortium)ENSG00000165837
GNOMAD BrowserENSG00000165837
Genetic variants : HAPMAP220081
Genomic Variants (DGV)ERICH6B [DGVbeta]
DECIPHERERICH6B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERICH6B 
Mutations
ICGC Data PortalERICH6B 
TCGA Data PortalERICH6B 
Broad Tumor PortalERICH6B
OASIS PortalERICH6B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDERICH6B
BioMutasearch ERICH6B
DgiDB (Drug Gene Interaction Database)ERICH6B
DoCM (Curated mutations)ERICH6B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERICH6B (select a term)
intoGenERICH6B
Cancer3DERICH6B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETERICH6B
MedgenERICH6B
Genetic Testing Registry ERICH6B
NextProtQ5W0A0 [Medical]
TSGene220081
GENETestsERICH6B
Target ValidationERICH6B
Huge Navigator ERICH6B [HugePedia]
snp3D : Map Gene to Disease220081
BioCentury BCIQERICH6B
ClinGenERICH6B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD220081
Chemical/Pharm GKB GenePA165505094
Clinical trialERICH6B
Miscellaneous
canSAR (ICR)ERICH6B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERICH6B
EVEXERICH6B
GoPubMedERICH6B
iHOPERICH6B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:27:49 CET 2017

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