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ERMN (ermin)

Identity

Alias_namesKIAA1189
KIAA1189
ermin, ERM-like protein
Alias_symbol (synonym)JN
ERMIN
Other alias
HGNC (Hugo) ERMN
LocusID (NCBI) 57471
Atlas_Id 62897
Location 2q24.1  [Link to chromosome band 2q24]
Location_base_pair Starts at 157318613 and ends at 157327713 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ERMN (2q24.1) / SEPT8 (5q31.1)TAF1D (11q21) / ERMN (2q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERMN   29208
Cards
Entrez_Gene (NCBI)ERMN  57471  ermin
AliasesJN; KIAA1189
GeneCards (Weizmann)ERMN
Ensembl hg19 (Hinxton)ENSG00000136541 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136541 [Gene_View]  chr2:157318613-157327713 [Contig_View]  ERMN [Vega]
ICGC DataPortalENSG00000136541
TCGA cBioPortalERMN
AceView (NCBI)ERMN
Genatlas (Paris)ERMN
WikiGenes57471
SOURCE (Princeton)ERMN
Genetics Home Reference (NIH)ERMN
Genomic and cartography
GoldenPath hg38 (UCSC)ERMN  -     chr2:157318613-157327713 -  2q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERMN  -     2q24.1   [Description]    (hg19-Feb_2009)
EnsemblERMN - 2q24.1 [CytoView hg19]  ERMN - 2q24.1 [CytoView hg38]
Mapping of homologs : NCBIERMN [Mapview hg19]  ERMN [Mapview hg38]
OMIM610072   
Gene and transcription
Genbank (Entrez)AA736604 AB033015 AI207881 AK295051 AK295844
RefSeq transcript (Entrez)NM_001009959 NM_001304344 NM_001304345 NM_001304346 NM_020711
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERMN
Cluster EST : UnigeneHs.707957 [ NCBI ]
CGAP (NCI)Hs.707957
Alternative Splicing GalleryENSG00000136541
Gene ExpressionERMN [ NCBI-GEO ]   ERMN [ EBI - ARRAY_EXPRESS ]   ERMN [ SEEK ]   ERMN [ MEM ]
Gene Expression Viewer (FireBrowse)ERMN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57471
GTEX Portal (Tissue expression)ERMN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TAM6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TAM6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TAM6
Splice isoforms : SwissVarQ8TAM6
PhosPhoSitePlusQ8TAM6
Domains : Interpro (EBI)Moesin_tail   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERMN
DMDM Disease mutations57471
Blocks (Seattle)ERMN
SuperfamilyQ8TAM6
Human Protein AtlasENSG00000136541
Peptide AtlasQ8TAM6
HPRD13838
IPIIPI00006746   IPI00553211   IPI00909214   IPI00916762   IPI00915776   IPI00915915   IPI00916364   IPI00917406   IPI00916498   
Protein Interaction databases
DIP (DOE-UCLA)Q8TAM6
IntAct (EBI)Q8TAM6
FunCoupENSG00000136541
BioGRIDERMN
STRING (EMBL)ERMN
ZODIACERMN
Ontologies - Pathways
QuickGOQ8TAM6
Ontology : AmiGOmorphogenesis of a branching structure  cytoplasm  cytoskeleton  cell cortex  actin filament organization  regulation of cell shape  filopodium  regulation of cell projection organization  internode region of axon  paranode region of axon  neuronal cell body  myelin sheath  actin filament binding  extracellular exosome  
Ontology : EGO-EBImorphogenesis of a branching structure  cytoplasm  cytoskeleton  cell cortex  actin filament organization  regulation of cell shape  filopodium  regulation of cell projection organization  internode region of axon  paranode region of axon  neuronal cell body  myelin sheath  actin filament binding  extracellular exosome  
NDEx NetworkERMN
Atlas of Cancer Signalling NetworkERMN
Wikipedia pathwaysERMN
Orthology - Evolution
OrthoDB57471
GeneTree (enSembl)ENSG00000136541
Phylogenetic Trees/Animal Genes : TreeFamERMN
HOVERGENQ8TAM6
HOGENOMQ8TAM6
Homologs : HomoloGeneERMN
Homology/Alignments : Family Browser (UCSC)ERMN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERMN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERMN
dbVarERMN
ClinVarERMN
1000_GenomesERMN 
Exome Variant ServerERMN
ExAC (Exome Aggregation Consortium)ERMN (select the gene name)
Genetic variants : HAPMAP57471
Genomic Variants (DGV)ERMN [DGVbeta]
DECIPHERERMN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERMN 
Mutations
ICGC Data PortalERMN 
TCGA Data PortalERMN 
Broad Tumor PortalERMN
OASIS PortalERMN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICERMN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDERMN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ERMN
DgiDB (Drug Gene Interaction Database)ERMN
DoCM (Curated mutations)ERMN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERMN (select a term)
intoGenERMN
Cancer3DERMN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610072   
Orphanet
MedgenERMN
Genetic Testing Registry ERMN
NextProtQ8TAM6 [Medical]
TSGene57471
GENETestsERMN
Target ValidationERMN
Huge Navigator ERMN [HugePedia]
snp3D : Map Gene to Disease57471
BioCentury BCIQERMN
ClinGenERMN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57471
Chemical/Pharm GKB GenePA162385355
Clinical trialERMN
Miscellaneous
canSAR (ICR)ERMN (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERMN
EVEXERMN
GoPubMedERMN
iHOPERMN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:15 CEST 2017

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