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ERO1B (endoplasmic reticulum oxidoreductase 1 beta)

Identity

Alias_namesERO1LB
ERO1-like beta (S. cerevisiae)
Alias_symbol (synonym)ERO1-L(beta)
Ero1beta
Other alias
HGNC (Hugo) ERO1B
LocusID (NCBI) 56605
Atlas_Id 55814
Location 1q42.3  [Link to chromosome band 1q42]
Location_base_pair Starts at 236215122 and ends at 236282039 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ERO1B (1q42.3) / HEATR1 (1q43)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ERO1B   14355
Cards
Entrez_Gene (NCBI)ERO1B  56605  endoplasmic reticulum oxidoreductase 1 beta
AliasesERO1LB; Ero1beta
GeneCards (Weizmann)ERO1B
Ensembl hg19 (Hinxton)ENSG00000086619 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000086619 [Gene_View]  chr1:236215122-236282039 [Contig_View]  ERO1B [Vega]
ICGC DataPortalENSG00000086619
TCGA cBioPortalERO1B
AceView (NCBI)ERO1B
Genatlas (Paris)ERO1B
WikiGenes56605
SOURCE (Princeton)ERO1B
Genetics Home Reference (NIH)ERO1B
Genomic and cartography
GoldenPath hg38 (UCSC)ERO1B  -     chr1:236215122-236282039 -  1q42.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERO1B  -     1q42.3   [Description]    (hg19-Feb_2009)
EnsemblERO1B - 1q42.3 [CytoView hg19]  ERO1B - 1q42.3 [CytoView hg38]
Mapping of homologs : NCBIERO1B [Mapview hg19]  ERO1B [Mapview hg38]
OMIM615437   
Gene and transcription
Genbank (Entrez)AF252538 AK001865 AK293941 AK315351 BC032823
RefSeq transcript (Entrez)NM_019891
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERO1B
Cluster EST : UnigeneHs.558519 [ NCBI ]
CGAP (NCI)Hs.558519
Alternative Splicing GalleryENSG00000086619
Gene ExpressionERO1B [ NCBI-GEO ]   ERO1B [ EBI - ARRAY_EXPRESS ]   ERO1B [ SEEK ]   ERO1B [ MEM ]
Gene Expression Viewer (FireBrowse)ERO1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56605
GTEX Portal (Tissue expression)ERO1B
Human Protein AtlasENSG00000086619-ERO1B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86YB8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86YB8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86YB8
Splice isoforms : SwissVarQ86YB8
Catalytic activity : Enzyme1.8.4.- [ Enzyme-Expasy ]   1.8.4.-1.8.4.- [ IntEnz-EBI ]   1.8.4.- [ BRENDA ]   1.8.4.- [ KEGG ]   
PhosPhoSitePlusQ86YB8
Domains : Interpro (EBI)Ero1   
Domain families : Pfam (Sanger)ERO1 (PF04137)   
Domain families : Pfam (NCBI)pfam04137   
Conserved Domain (NCBI)ERO1B
DMDM Disease mutations56605
Blocks (Seattle)ERO1B
SuperfamilyQ86YB8
Human Protein Atlas [tissue]ENSG00000086619-ERO1B [tissue]
Peptide AtlasQ86YB8
HPRD13279
IPIIPI00429633   IPI00872377   IPI00643134   IPI00480093   
Protein Interaction databases
DIP (DOE-UCLA)Q86YB8
IntAct (EBI)Q86YB8
FunCoupENSG00000086619
BioGRIDERO1B
STRING (EMBL)ERO1B
ZODIACERO1B
Ontologies - Pathways
QuickGOQ86YB8
Ontology : AmiGOprotein disulfide isomerase activity  protein binding  endoplasmic reticulum  endoplasmic reticulum membrane  protein folding  cellular protein modification process  protein disulfide oxidoreductase activity  oxidoreductase activity  oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor  4-hydroxyproline metabolic process  protein maturation by protein folding  insulin processing  extracellular matrix organization  protein folding in endoplasmic reticulum  glucose homeostasis  cell redox homeostasis  unfolded protein binding  oxidation-reduction process  
Ontology : EGO-EBIprotein disulfide isomerase activity  protein binding  endoplasmic reticulum  endoplasmic reticulum membrane  protein folding  cellular protein modification process  protein disulfide oxidoreductase activity  oxidoreductase activity  oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor  4-hydroxyproline metabolic process  protein maturation by protein folding  insulin processing  extracellular matrix organization  protein folding in endoplasmic reticulum  glucose homeostasis  cell redox homeostasis  unfolded protein binding  oxidation-reduction process  
NDEx NetworkERO1B
Atlas of Cancer Signalling NetworkERO1B
Wikipedia pathwaysERO1B
Orthology - Evolution
OrthoDB56605
GeneTree (enSembl)ENSG00000086619
Phylogenetic Trees/Animal Genes : TreeFamERO1B
HOVERGENQ86YB8
HOGENOMQ86YB8
Homologs : HomoloGeneERO1B
Homology/Alignments : Family Browser (UCSC)ERO1B
Gene fusions - Rearrangements
Tumor Fusion PortalERO1B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERO1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERO1B
dbVarERO1B
ClinVarERO1B
1000_GenomesERO1B 
Exome Variant ServerERO1B
ExAC (Exome Aggregation Consortium)ENSG00000086619
GNOMAD BrowserENSG00000086619
Genetic variants : HAPMAP56605
Genomic Variants (DGV)ERO1B [DGVbeta]
DECIPHERERO1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERO1B 
Mutations
ICGC Data PortalERO1B 
TCGA Data PortalERO1B 
Broad Tumor PortalERO1B
OASIS PortalERO1B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDERO1B
BioMutasearch ERO1B
DgiDB (Drug Gene Interaction Database)ERO1B
DoCM (Curated mutations)ERO1B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERO1B (select a term)
intoGenERO1B
Cancer3DERO1B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615437   
Orphanet
DisGeNETERO1B
MedgenERO1B
Genetic Testing Registry ERO1B
NextProtQ86YB8 [Medical]
TSGene56605
GENETestsERO1B
Target ValidationERO1B
Huge Navigator ERO1B [HugePedia]
snp3D : Map Gene to Disease56605
BioCentury BCIQERO1B
ClinGenERO1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56605
Chemical/Pharm GKB GenePA134918597
Clinical trialERO1B
Miscellaneous
canSAR (ICR)ERO1B (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERO1B
EVEXERO1B
GoPubMedERO1B
iHOPERO1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:12:17 CET 2017

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