Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ERVH48-1 (endogenous retrovirus group 48, member 1)

Identity

Alias_namesC21orf105
NDUFV3-AS1
chromosome 21 open reading frame 105
NDUFV3 antisense RNA 1 (non-protein coding)
endogenous retrovirus group 48, member 1
Other alias
HGNC (Hugo) ERVH48-1
LocusID (NCBI) 90625
Atlas_Id 62909
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44337361 and ends at 44345708 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ERVH48-1   17216
Cards
Entrez_Gene (NCBI)ERVH48-1  90625  endogenous retrovirus group 48, member 1
AliasesC21orf105; NDUFV3-AS1
GeneCards (Weizmann)ERVH48-1
Ensembl hg19 (Hinxton) [Gene_View]  chr21:44337361-44345708 [Contig_View]  ERVH48-1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:44337361-44345708 [Contig_View]  ERVH48-1 [Vega]
TCGA cBioPortalERVH48-1
AceView (NCBI)ERVH48-1
Genatlas (Paris)ERVH48-1
WikiGenes90625
SOURCE (Princeton)ERVH48-1
Genetics Home Reference (NIH)ERVH48-1
Genomic and cartography
GoldenPath hg19 (UCSC)ERVH48-1  -     chr21:44337361-44345708 -  21q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ERVH48-1  -     21q22.3   [Description]    (hg38-Dec_2013)
EnsemblERVH48-1 - 21q22.3 [CytoView hg19]  ERVH48-1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIERVH48-1 [Mapview hg19]  ERVH48-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB610407 BC005107
RefSeq transcript (Entrez)NM_001308491
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929427
Consensus coding sequences : CCDS (NCBI)ERVH48-1
Gene ExpressionERVH48-1 [ NCBI-GEO ]   ERVH48-1 [ EBI - ARRAY_EXPRESS ]   ERVH48-1 [ SEEK ]   ERVH48-1 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVH48-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)90625
GTEX Portal (Tissue expression)ERVH48-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVH48-1
DMDM Disease mutations90625
Blocks (Seattle)ERVH48-1
IPIIPI00029542   IPI00847371   
Protein Interaction databases
BioGRIDERVH48-1
STRING (EMBL)ERVH48-1
ZODIACERVH48-1
Ontologies - Pathways
Huge Navigator ERVH48-1 [HugePedia]
snp3D : Map Gene to Disease90625
BioCentury BCIQERVH48-1
ClinGenERVH48-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90625
Chemical/Pharm GKB GenePA142672213
Clinical trialERVH48-1
Miscellaneous
canSAR (ICR)ERVH48-1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVH48-1
EVEXERVH48-1
GoPubMedERVH48-1
iHOPERVH48-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:03:08 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.