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ERVK-2 (endogenous retrovirus group K member 2)

Identity

Alias_namesendogenous retrovirus group K, member 2
Alias_symbol (synonym)c3_A
Other alias
HGNC (Hugo) ERVK-2
LocusID (NCBI) 100616100
Atlas_Id 79515
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 9849360 and ends at 9849723 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ERVK-2   39001
Cards
Entrez_Gene (NCBI)ERVK-2  100616100  endogenous retrovirus group K member 2
Aliasesc3_A
GeneCards (Weizmann)ERVK-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:9849360-9849723 [Contig_View]  ERVK-2 [Vega]
TCGA cBioPortalERVK-2
AceView (NCBI)ERVK-2
Genatlas (Paris)ERVK-2
WikiGenes100616100
SOURCE (Princeton)ERVK-2
Genetics Home Reference (NIH)ERVK-2
Genomic and cartography
GoldenPath hg38 (UCSC)ERVK-2  -     chr3:9849360-9849723 -  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERVK-2  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblERVK-2 - 3p25.3 [CytoView hg19]  ERVK-2 - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBIERVK-2 [Mapview hg19]  ERVK-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)EF153331 FN806829
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVK-2
Gene ExpressionERVK-2 [ NCBI-GEO ]   ERVK-2 [ EBI - ARRAY_EXPRESS ]   ERVK-2 [ SEEK ]   ERVK-2 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVK-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616100
GTEX Portal (Tissue expression)ERVK-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVK-2
DMDM Disease mutations100616100
Blocks (Seattle)ERVK-2
Protein Interaction databases
BioGRIDERVK-2
STRING (EMBL)ERVK-2
ZODIACERVK-2
Ontologies - Pathways
Huge Navigator ERVK-2 [HugePedia]
snp3D : Map Gene to Disease100616100
BioCentury BCIQERVK-2
ClinGenERVK-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616100
Clinical trialERVK-2
Miscellaneous
canSAR (ICR)ERVK-2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVK-2
EVEXERVK-2
GoPubMedERVK-2
iHOPERVK-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:27:56 CET 2017

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