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ERVK-4 (endogenous retrovirus group K member 4)

Identity

Alias_namesERVK4
endogenous retroviral sequence K (G1), 4
endogenous retrovirus group K, member 4
Alias_symbol (synonym)HERV-K(I)
Other aliasHERV-KI
HGNC (Hugo) ERVK-4
LocusID (NCBI) 60359
Atlas_Id 62913
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 4591782 and ends at 4593951 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ERVK-4   13756
Cards
Entrez_Gene (NCBI)ERVK-4  60359  endogenous retrovirus group K member 4
AliasesERVK4; HERV-K(I); HERV-KI
GeneCards (Weizmann)ERVK-4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:4591782-4593951 [Contig_View]  ERVK-4 [Vega]
TCGA cBioPortalERVK-4
AceView (NCBI)ERVK-4
Genatlas (Paris)ERVK-4
WikiGenes60359
SOURCE (Princeton)ERVK-4
Genetics Home Reference (NIH)ERVK-4
Genomic and cartography
GoldenPath hg38 (UCSC)ERVK-4  -     chr7:4591782-4593951 -  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERVK-4  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblERVK-4 - 7p22.1 [CytoView hg19]  ERVK-4 - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIERVK-4 [Mapview hg19]  ERVK-4 [Mapview hg38]
OMIM614011   
Gene and transcription
Genbank (Entrez)AY371031 AY371037 AY371041 AY395520 AY395523
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVK-4
Gene ExpressionERVK-4 [ NCBI-GEO ]   ERVK-4 [ EBI - ARRAY_EXPRESS ]   ERVK-4 [ SEEK ]   ERVK-4 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVK-4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)60359
GTEX Portal (Tissue expression)ERVK-4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVK-4
DMDM Disease mutations60359
Blocks (Seattle)ERVK-4
IPIIPI01018819   IPI00414905   
Protein Interaction databases
BioGRIDERVK-4
STRING (EMBL)ERVK-4
ZODIACERVK-4
Ontologies - Pathways
Huge Navigator ERVK-4 [HugePedia]
snp3D : Map Gene to Disease60359
BioCentury BCIQERVK-4
ClinGenERVK-4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD60359
Chemical/Pharm GKB GenePA27870
Clinical trialERVK-4
Miscellaneous
canSAR (ICR)ERVK-4 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVK-4
EVEXERVK-4
GoPubMedERVK-4
iHOPERVK-4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:07:24 CET 2017

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