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ERVK3-6 (endogenous retrovirus group K3 member 6)

Identity

Alias_namesendogenous retrovirus group K3, member 6
Alias_symbol (synonym)HML6-c19A
Other alias
HGNC (Hugo) ERVK3-6
LocusID (NCBI) 100616107
Atlas_Id 80003
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51808334 and ends at 51808671 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ERVK3-6   39111
Cards
Entrez_Gene (NCBI)ERVK3-6  100616107  endogenous retrovirus group K3 member 6
AliasesHML6-c19A
GeneCards (Weizmann)ERVK3-6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:51808334-51808671 [Contig_View]  ERVK3-6 [Vega]
TCGA cBioPortalERVK3-6
AceView (NCBI)ERVK3-6
Genatlas (Paris)ERVK3-6
WikiGenes100616107
SOURCE (Princeton)ERVK3-6
Genetics Home Reference (NIH)ERVK3-6
Genomic and cartography
GoldenPath hg38 (UCSC)ERVK3-6  -     chr19:51808334-51808671 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ERVK3-6  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblERVK3-6 - 19q13.41 [CytoView hg19]  ERVK3-6 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIERVK3-6 [Mapview hg19]  ERVK3-6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)FR714896
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVK3-6
Gene ExpressionERVK3-6 [ NCBI-GEO ]   ERVK3-6 [ EBI - ARRAY_EXPRESS ]   ERVK3-6 [ SEEK ]   ERVK3-6 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVK3-6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616107
GTEX Portal (Tissue expression)ERVK3-6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ERVK3-6
DMDM Disease mutations100616107
Blocks (Seattle)ERVK3-6
Protein Interaction databases
BioGRIDERVK3-6
STRING (EMBL)ERVK3-6
ZODIACERVK3-6
Ontologies - Pathways
Huge Navigator ERVK3-6 [HugePedia]
snp3D : Map Gene to Disease100616107
BioCentury BCIQERVK3-6
ClinGenERVK3-6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616107
Clinical trialERVK3-6
Miscellaneous
canSAR (ICR)ERVK3-6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVK3-6
EVEXERVK3-6
GoPubMedERVK3-6
iHOPERVK3-6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:32 CET 2017

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