ERVK6 (endogenous retroviral sequence K, 6)

Identity

Other names	-
HGNC	ERVK6
Location	7
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	ERVK6   13915
Entrez_Gene	ERVK6  64006  endogenous retroviral sequence K, 6
	Cards
GeneCards	ERVK6
Ensembl	ERVK6 [Search_View]   ENSG00000136286 [Gene_View]
Genatlas	ERVK6
GeneLynx	ERVK6
eGenome	ERVK6
euGene	64006
	Genomic and cartography
GoldenPath	ERVK6  -  7
Ensembl	ERVK6 - [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ERVK6
	Gene and transcription
Genbank	AF080233 [ ENTREZ ]
Genbank	DQ069911 [ ENTREZ ]
Genbank	DQ069913 [ ENTREZ ]
Genbank	DQ821442 [ ENTREZ ]
Genbank	U87590 [ ENTREZ ]
RefSeq	NM_001007236 [ SRS ]    NM_001007236 [ ENTREZ ]
AceView	ERVK6 AceView - NCBI
Fast-db	1102 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O15310 [ SRS]    O15310 [ EXPASY ]     O15310 [ INTERPRO ]     O15310 [ UNIPROT ]
Prosite	PS50878 RT_POL [ SRS ]    PS50878 RT_POL [ Expasy ]
Interpro	IPR000477 DNA_pol_RVTase [ SRS ]    IPR000477 DNA_pol_RVTase [ EBI ]
Interpro	IPR010661 RVT_thumb [ SRS ]    IPR010661 RVT_thumb [ EBI ]
CluSTr	O15310
Pfam	PF00078 RVT_1 [ SRS ]    PF00078 RVT_1 [ Sanger ]    pfam00078 [ NCBI-CDD ]
Pfam	PF06817 RVT_thumb [ SRS ]    PF06817 RVT_thumb [ Sanger ]    pfam06817 [ NCBI-CDD ]
Blocks	O15310
HPRD	16131
	Protein Interaction databases
DIP	O15310
IntAct	O15310
	Polymorphism : SNP, mutations, diseases
OMIM	605626    [ map ]
GENECLINICS	605626
SNP	ERVK6 [dbSNP-NCBI]
SNP	NM_001007236 [SNP-NCI]
SNP	ERVK6 [GeneSNPs - Utah]  ERVK6] [HGBASE - SRS]
HAPMAP	ERVK6 [HAPMAP]
HGMD	ERVK6
	General knowledge
Family Browser	ERVK6 [UCSC Family Browser]
SOURCE	NM_001007236
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	DNA-directed DNA polymerase activity [Amigo]  DNA-directed DNA polymerase activity
GO	RNA-directed DNA polymerase activity [Amigo]  RNA-directed DNA polymerase activity
GO	aspartic-type endopeptidase activity [Amigo]  aspartic-type endopeptidase activity
GO	endonuclease activity [Amigo]  endonuclease activity
GO	ribonuclease H activity [Amigo]  ribonuclease H activity
GO	structural molecule activity [Amigo]  structural molecule activity
GO	intracellular [Amigo]  intracellular
GO	plasma membrane [Amigo]  plasma membrane
GO	RNA-dependent DNA replication [Amigo]  RNA-dependent DNA replication
GO	DNA recombination [Amigo]  DNA recombination
GO	proteolysis [Amigo]  proteolysis
GO	peptidase activity [Amigo]  peptidase activity
GO	zinc ion binding [Amigo]  zinc ion binding
GO	integrase activity [Amigo]  integrase activity
GO	DNA integration [Amigo]  DNA integration
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	viral reproduction [Amigo]  viral reproduction
GO	transferase activity [Amigo]  transferase activity
GO	nucleotidyltransferase activity [Amigo]  nucleotidyltransferase activity
GO	hydrolase activity [Amigo]  hydrolase activity
GO	virion [Amigo]  virion
GO	viral capsid [Amigo]  viral capsid
GO	viral envelope [Amigo]  viral envelope
GO	transposition [Amigo]  transposition
GO	dUTP metabolic process [Amigo]  dUTP metabolic process
GO	metal ion binding [Amigo]  metal ion binding
PubGene	ERVK6
TreeFam	ERVK6
CTD	64006 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ERVK6 Related clones (RZPD - Berlin)
	PubMed
PubMed	19 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:40:22 2008