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ERVS71-1 (endogenous retrovirus group S71 member 1, envelope)

Identity

Other aliasenvT
HGNC (Hugo) ERVS71-1
LocusID (NCBI) 100862694
Atlas_Id 56987
Location 19p12  [Link to chromosome band 19p12]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ERVS71-1   41525
Cards
Entrez_Gene (NCBI)ERVS71-1  100862694  endogenous retrovirus group S71 member 1, envelope
AliasesenvT
GeneCards (Weizmann)ERVS71-1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ERVS71-1 [Vega]
TCGA cBioPortalERVS71-1
AceView (NCBI)ERVS71-1
Genatlas (Paris)ERVS71-1
WikiGenes100862694
SOURCE (Princeton)ERVS71-1
Genetics Home Reference (NIH)ERVS71-1
Genomic and cartography
GoldenPath hg38 (UCSC)ERVS71-1  -  
GoldenPath hg19 (UCSC)ERVS71-1  -  
EnsemblERVS71-1 - [CytoView hg19]  ERVS71-1 - [CytoView hg38]
Mapping of homologs : NCBIERVS71-1 [Mapview hg19]  ERVS71-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ932595 BQ941761 CN288807
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ERVS71-1
Gene ExpressionERVS71-1 [ NCBI-GEO ]   ERVS71-1 [ EBI - ARRAY_EXPRESS ]   ERVS71-1 [ SEEK ]   ERVS71-1 [ MEM ]
Gene Expression Viewer (FireBrowse)ERVS71-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100862694
GTEX Portal (Tissue expression)ERVS71-1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP61550   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP61550  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP61550
Splice isoforms : SwissVarP61550
PhosPhoSitePlusP61550
Domains : Interpro (EBI)FMuLV_rcpt-bd    TLV/ENV_coat_polyprotein   
Domain families : Pfam (Sanger)TLV_coat (PF00429)   
Domain families : Pfam (NCBI)pfam00429   
Conserved Domain (NCBI)ERVS71-1
DMDM Disease mutations100862694
Blocks (Seattle)ERVS71-1
SuperfamilyP61550
Peptide AtlasP61550
Protein Interaction databases
DIP (DOE-UCLA)P61550
IntAct (EBI)P61550
BioGRIDERVS71-1
STRING (EMBL)ERVS71-1
ZODIACERVS71-1
Ontologies - Pathways
QuickGOP61550
Ontology : AmiGOmolecular_function  structural molecule activity  cellular_component  plasma membrane  integral component of membrane  viral capsid  viral life cycle  plasma membrane fusion  
Ontology : EGO-EBImolecular_function  structural molecule activity  cellular_component  plasma membrane  integral component of membrane  viral capsid  viral life cycle  plasma membrane fusion  
NDEx NetworkERVS71-1
Atlas of Cancer Signalling NetworkERVS71-1
Wikipedia pathwaysERVS71-1
Orthology - Evolution
OrthoDB100862694
Phylogenetic Trees/Animal Genes : TreeFamERVS71-1
HOVERGENP61550
HOGENOMP61550
Homologs : HomoloGeneERVS71-1
Homology/Alignments : Family Browser (UCSC)ERVS71-1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerERVS71-1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ERVS71-1
dbVarERVS71-1
ClinVarERVS71-1
1000_GenomesERVS71-1 
Exome Variant ServerERVS71-1
ExAC (Exome Aggregation Consortium)ERVS71-1 (select the gene name)
Genetic variants : HAPMAP100862694
Genomic Variants (DGV)ERVS71-1 [DGVbeta]
DECIPHERERVS71-1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisERVS71-1 
Mutations
ICGC Data PortalERVS71-1 
TCGA Data PortalERVS71-1 
Broad Tumor PortalERVS71-1
OASIS PortalERVS71-1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDERVS71-1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ERVS71-1
DgiDB (Drug Gene Interaction Database)ERVS71-1
DoCM (Curated mutations)ERVS71-1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ERVS71-1 (select a term)
intoGenERVS71-1
Cancer3DERVS71-1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenERVS71-1
Genetic Testing Registry ERVS71-1
NextProtP61550 [Medical]
TSGene100862694
GENETestsERVS71-1
Target ValidationERVS71-1
Huge Navigator ERVS71-1 [HugePedia]
snp3D : Map Gene to Disease100862694
BioCentury BCIQERVS71-1
ClinGenERVS71-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100862694
Clinical trialERVS71-1
Miscellaneous
canSAR (ICR)ERVS71-1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineERVS71-1
EVEXERVS71-1
GoPubMedERVS71-1
iHOPERVS71-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:07:17 CEST 2017

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