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ESCO1 (establishment of cohesion 1 homolog 1 (S. cerevisiae))

Identity

Other namesA930014I12Rik
CTF
ECO1
EFO1
ESO1
HGNC (Hugo) ESCO1
LocusID (NCBI) 114799
Location 18q11.2
Location_base_pair Starts at 19109262 and ends at 19180693 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ESCO1   24645
Entrez_Gene (NCBI)ESCO1  114799  establishment of cohesion 1 homolog 1 (S. cerevisiae)
Cards
GeneCards (Weizmann)ESCO1
Ensembl (Hinxton)ENSG00000141446 [Gene_View]  chr18:19109262-19180693 [Contig_View]  ESCO1 [Vega]
AceView (NCBI)ESCO1
Genatlas (Paris)ESCO1
SOURCE (Stanford)NM_052911
Genomic and cartography
GoldenPath (UCSC)ESCO1  -  18q11.2   chr18:19109262-19180693 -  18q11.2   [Description]    (hg19-Feb_2009)
EnsemblESCO1 - 18q11.2 [CytoView]
Mapping of homologs : NCBIESCO1 [Mapview]
OMIM609674   
Gene and transcription
Genbank (Entrez)AB067498 AK090579 AK096746 AL832041 AL834200
RefSeq transcript (SRS)NM_052911
RefSeq transcript (Entrez)NM_052911
RefSeq genomic (SRS)AC_000150 NC_000018 NC_018929 NT_010966 NW_001838467 NW_004078095
RefSeq genomic (Entrez)AC_000150 NC_000018 NC_018929 NT_010966 NW_001838467 NW_004078095
Consensus coding sequences : CCDS (NCBI)ESCO1
Cluster EST : UnigeneHs.464733 [ SRS ] Hs.464733 [ NCBI ]
CGAP (NCI)Hs.464733
Alternative Splicing : Fast-db (Paris)GSHG0014214
Alternative Splicing GalleryENSG00000141446
Gene ExpressionESCO1 [ NCBI-GEO ]   ESCO1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5FWF5 (SRS) Q5FWF5 (Uniprot)
NextProtQ5FWF5
With graphics : InterProQ5FWF5
Splice isoforms : SwissVarQ5FWF5(Swissvar)
Domains : Interpro (SRS)AcTrfase_ESCO   
Domains : Interpro (EBI)AcTrfase_ESCO   
Related proteins : CluSTrQ5FWF5
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM114799
Blocks (Seattle)Q5FWF5
Human Protein AtlasENSG00000141446
HPRD16868
IPIIPI00552279   IPI00604608   IPI00289838   
Protein Interaction databases
DIP (DOE-UCLA)Q5FWF5
IntAct (EBI)Q5FWF5
FunCoupENSG00000141446
REACTOMEESCO1
Protein Interaction Database114799
BioGRIDESCO1
InParanoidQ5FWF5
Interologous Interaction database Q5FWF5
IntegromeDBESCO1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ESCO1
SNP (GeneSNP Utah)ESCO1
SNP : HGBaseESCO1
Genetic variants : HAPMAPESCO1
Somatic Mutations in Cancer : COSMICESCO1 
CONAN: Copy Number AnalysisESCO1 
Mutations and Diseases : HGMDESCO1
OMIM609674   
GENETests609674   
Disease Genetic AssociationESCO1
Huge Navigator ESCO1 [HugePedia]  ESCO1 [HugeCancerGEM]
Genomic VariantsESCO1  ESCO1 [DGVbeta]
snp3D : Map Gene to Disease114799
General knowledge
Homologs : HomoloGeneESCO1
Homology/Alignments : Family Browser (UCSC)ESCO1
Phylogenetic Trees/Animal Genes : TreeFamESCO1
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.- [ Enzyme-SRS ]   2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
Chemical/Protein Interactions : CTD114799
Chemical/Pharm GKB GenePA134924215
Clinical trialESCO1
Cancer Resource (Charite)ENSG00000141446
Ontology : AmiGOchromatin  nucleus  regulation of DNA replication  cell cycle  transferase activity, transferring acyl groups  post-translational protein acetylation  metal ion binding  
Ontology : EGO-EBIchromatin  nucleus  regulation of DNA replication  cell cycle  transferase activity, transferring acyl groups  post-translational protein acetylation  metal ion binding  
Pathways : KEGGEthylbenzene degradationAlkaloid biosynthesis IILimonene and pinene degradationPhenylalanine metabolismValine, leucine and isoleucine degradationTyrosine metabolismBenzoate degradation via CoA ligationGlycerophospholipid metabolism1- and 2-Methylnaphthalene degradation
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneESCO1
iHOPESCO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:27:04 CEST 2013
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