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ETNK2 (ethanolamine kinase 2)

Identity

Alias_symbol (synonym)FLJ10761
EKI2
Other aliasHMFT1716
HGNC (Hugo) ETNK2
LocusID (NCBI) 55224
Atlas_Id 62930
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 204131061 and ends at 204152182 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ETNK2 (1q32.1) / MMP14 (14q11.2)MBP (18q23) / ETNK2 (1q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ETNK2   25575
Cards
Entrez_Gene (NCBI)ETNK2  55224  ethanolamine kinase 2
AliasesEKI2; HMFT1716
GeneCards (Weizmann)ETNK2
Ensembl hg19 (Hinxton)ENSG00000143845 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143845 [Gene_View]  chr1:204131061-204152182 [Contig_View]  ETNK2 [Vega]
ICGC DataPortalENSG00000143845
TCGA cBioPortalETNK2
AceView (NCBI)ETNK2
Genatlas (Paris)ETNK2
WikiGenes55224
SOURCE (Princeton)ETNK2
Genetics Home Reference (NIH)ETNK2
Genomic and cartography
GoldenPath hg38 (UCSC)ETNK2  -     chr1:204131061-204152182 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ETNK2  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblETNK2 - 1q32.1 [CytoView hg19]  ETNK2 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIETNK2 [Mapview hg19]  ETNK2 [Mapview hg38]
OMIM609859   
Gene and transcription
Genbank (Entrez)AA854978 AB073608 AK001623 AK293426 AK302145
RefSeq transcript (Entrez)NM_001297760 NM_001297761 NM_001297762 NM_018208
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ETNK2
Cluster EST : UnigeneHs.497469 [ NCBI ]
CGAP (NCI)Hs.497469
Alternative Splicing GalleryENSG00000143845
Gene ExpressionETNK2 [ NCBI-GEO ]   ETNK2 [ EBI - ARRAY_EXPRESS ]   ETNK2 [ SEEK ]   ETNK2 [ MEM ]
Gene Expression Viewer (FireBrowse)ETNK2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55224
GTEX Portal (Tissue expression)ETNK2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVF9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVF9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVF9
Splice isoforms : SwissVarQ9NVF9
Catalytic activity : Enzyme2.7.1.82 [ Enzyme-Expasy ]   2.7.1.822.7.1.82 [ IntEnz-EBI ]   2.7.1.82 [ BRENDA ]   2.7.1.82 [ KEGG ]   
PhosPhoSitePlusQ9NVF9
Domains : Interpro (EBI)Kinase-like_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ETNK2
DMDM Disease mutations55224
Blocks (Seattle)ETNK2
SuperfamilyQ9NVF9
Human Protein AtlasENSG00000143845
Peptide AtlasQ9NVF9
HPRD13283
IPIIPI00514943   IPI00019374   IPI00514040   IPI00642966   IPI00640580   IPI00916438   IPI00916571   IPI00916792   
Protein Interaction databases
DIP (DOE-UCLA)Q9NVF9
IntAct (EBI)Q9NVF9
FunCoupENSG00000143845
BioGRIDETNK2
STRING (EMBL)ETNK2
ZODIACETNK2
Ontologies - Pathways
QuickGOQ9NVF9
Ontology : AmiGOin utero embryonic development  placenta development  ethanolamine kinase activity  ATP binding  cellular_component  cytosol  phosphatidylethanolamine biosynthetic process  phosphatidylethanolamine biosynthetic process  biological_process  post-embryonic development  phosphorylation  multicellular organism growth  
Ontology : EGO-EBIin utero embryonic development  placenta development  ethanolamine kinase activity  ATP binding  cellular_component  cytosol  phosphatidylethanolamine biosynthetic process  phosphatidylethanolamine biosynthetic process  biological_process  post-embryonic development  phosphorylation  multicellular organism growth  
Pathways : KEGGGlycerophospholipid metabolism   
NDEx NetworkETNK2
Atlas of Cancer Signalling NetworkETNK2
Wikipedia pathwaysETNK2
Orthology - Evolution
OrthoDB55224
GeneTree (enSembl)ENSG00000143845
Phylogenetic Trees/Animal Genes : TreeFamETNK2
HOVERGENQ9NVF9
HOGENOMQ9NVF9
Homologs : HomoloGeneETNK2
Homology/Alignments : Family Browser (UCSC)ETNK2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerETNK2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ETNK2
dbVarETNK2
ClinVarETNK2
1000_GenomesETNK2 
Exome Variant ServerETNK2
ExAC (Exome Aggregation Consortium)ETNK2 (select the gene name)
Genetic variants : HAPMAP55224
Genomic Variants (DGV)ETNK2 [DGVbeta]
DECIPHERETNK2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisETNK2 
Mutations
ICGC Data PortalETNK2 
TCGA Data PortalETNK2 
Broad Tumor PortalETNK2
OASIS PortalETNK2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICETNK2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDETNK2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ETNK2
DgiDB (Drug Gene Interaction Database)ETNK2
DoCM (Curated mutations)ETNK2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ETNK2 (select a term)
intoGenETNK2
Cancer3DETNK2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609859   
Orphanet
MedgenETNK2
Genetic Testing Registry ETNK2
NextProtQ9NVF9 [Medical]
TSGene55224
GENETestsETNK2
Target ValidationETNK2
Huge Navigator ETNK2 [HugePedia]
snp3D : Map Gene to Disease55224
BioCentury BCIQETNK2
ClinGenETNK2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55224
Chemical/Pharm GKB GenePA134888760
Clinical trialETNK2
Miscellaneous
canSAR (ICR)ETNK2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineETNK2
EVEXETNK2
GoPubMedETNK2
iHOPETNK2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:23 CEST 2017

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