ETV1 (ets variant gene 1)

Identity

Other names	DKFZp781L0674
	ER81
	MGC104699
	MGC120533
	MGC120534
HGNC	ETV1
Location	7p22
Location_base_pair	Starts at 13897381 and ends at 13995289 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ETV1   3490
Entrez_Gene	ETV1  2115  ets variant gene 1
	Cards
GeneCards	ETV1
Ensembl	ETV1 [Search_View]   ENSG00000006468 [Gene_View]
Genatlas	ETV1
GeneLynx	ETV1
eGenome	ETV1
euGene	2115
	Genomic and cartography
GoldenPath	ETV1  -  7p22   chr7:13897381-13995289 -  7p21.2   [Description]    (hg18-March_2006)
Ensembl	ETV1 - 7p21.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ETV1
	Gene and transcription
Genbank	AB209202 [ ENTREZ ]
Genbank	AF070641 [ ENTREZ ]
Genbank	AK055368 [ ENTREZ ]
Genbank	AK309190 [ ENTREZ ]
Genbank	AK311089 [ ENTREZ ]
RefSeq	NM_004956 [ SRS ]    NM_004956 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
AceView	ETV1 AceView - NCBI
Unigene	Hs.22634 [ SRS ]    Hs.22634 [ NCBI ]     HS22634 [ spliceNest ]
Fast-db	2108 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P50549 [ SRS]    P50549 [ EXPASY ]     P50549 [ INTERPRO ]     P50549 [ UNIPROT ]
Prosite	PS00345 ETS_DOMAIN_1 [ SRS ]    PS00345 ETS_DOMAIN_1 [ Expasy ]
Prosite	PS00346 ETS_DOMAIN_2 [ SRS ]    PS00346 ETS_DOMAIN_2 [ Expasy ]
Prosite	PS50061 ETS_DOMAIN_3 [ SRS ]    PS50061 ETS_DOMAIN_3 [ Expasy ]
Interpro	IPR000418 Ets [ SRS ]    IPR000418 Ets [ EBI ]
Interpro	IPR006715 ETS_PEA3_N [ SRS ]    IPR006715 ETS_PEA3_N [ EBI ]
Interpro	IPR011991 Wing_hlx_DNA_bd [ SRS ]    IPR011991 Wing_hlx_DNA_bd [ EBI ]
CluSTr	P50549
Pfam	PF00178 Ets [ SRS ]    PF00178 Ets [ Sanger ]    pfam00178 [ NCBI-CDD ]
Pfam	PF04621 ETS_PEA3_N [ SRS ]    PF04621 ETS_PEA3_N [ Sanger ]    pfam04621 [ NCBI-CDD ]
Smart	SM00413 ETS [EMBL]
Blocks	P50549
HPRD	02765
	Protein Interaction databases
DIP	P50549
IntAct	P50549
	Polymorphism : SNP, mutations, diseases
OMIM	600541    [ map ]
GENECLINICS	600541
SNP	ETV1 [dbSNP-NCBI]
SNP	NM_004956 [SNP-NCI]
SNP	ETV1 [GeneSNPs - Utah]  ETV1] [HGBASE - SRS]
HAPMAP	ETV1 [HAPMAP]
COSMIC	ETV1 [Somatic mutation (COSMIC-CGP-Sanger)]
TICdb	transcription [Translocation breakpoints In Cancer]
HGMD	ETV1
	General knowledge
Family Browser	ETV1 [UCSC Family Browser]
SOURCE	NM_004956
SMD	Hs.22634
SAGE	Hs.22634
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	transcription from RNA polymerase II promoter [Amigo]  transcription from RNA polymerase II promoter
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	ETV1
TreeFam	ETV1
CTD	2115 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ETV1 Related clones (RZPD - Berlin)
	PubMed
PubMed	27 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:40:26 2008