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ETV7 (ets variant 7)

Identity

Other namesTEL-2
TEL2
TELB
HGNC (Hugo) ETV7
LocusID (NCBI) 51513
Location 6p21.31
Location_base_pair Starts at 36321998 and ends at 36355577 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ETV7   18160
Entrez_Gene (NCBI)ETV7  51513  ets variant 7
Cards
GeneCards (Weizmann)ETV7
Ensembl (Hinxton)ENSG00000010030 [Gene_View]  chr6:36321998-36355577 [Contig_View]  ETV7 [Vega]
AceView (NCBI)ETV7
Genatlas (Paris)ETV7
SOURCE (Stanford)NM_001207035 NM_001207036 NM_001207037 NM_001207038 NM_001207039 NM_001207040 NM_001207041 NM_016135
Genomic and cartography
GoldenPath (UCSC)ETV7  -  6p21.31   chr6:36321998-36355577 -  6p21.31   [Description]    (hg19-Feb_2009)
EnsemblETV7 - 6p21.31 [CytoView]
Mapping of homologs : NCBIETV7 [Mapview]
OMIM605255   
Gene and transcription
Genbank (Entrez)AF116508 AF116509 AF116510 AF147782 AF175387
RefSeq transcript (SRS)NM_001207035 NM_001207036 NM_001207037 NM_001207038 NM_001207039 NM_001207040 NM_001207041 NM_016135
RefSeq transcript (Entrez)NM_001207035 NM_001207036 NM_001207037 NM_001207038 NM_001207039 NM_001207040 NM_001207041 NM_016135
RefSeq genomic (SRS)AC_000138 NC_000006 NC_018917 NG_029211 NT_007592 NW_001838980 NW_004078026
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NG_029211 NT_007592 NW_001838980 NW_004078026
Consensus coding sequences : CCDS (NCBI)ETV7
Cluster EST : UnigeneHs.272398 [ SRS ] Hs.272398 [ NCBI ]
CGAP (NCI)Hs.272398
Alternative Splicing : Fast-db (Paris)GSHG0026563
Alternative Splicing GalleryENSG00000010030
Gene ExpressionETV7 [ NCBI-GEO ]   ETV7 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y603 (SRS) Q9Y603 (Uniprot)
NextProtQ9Y603
With graphics : InterProQ9Y603
Splice isoforms : SwissVarQ9Y603(Swissvar)
Domaine pattern : Prosite (SRS)ETS_DOMAIN_1 (PS00345)    ETS_DOMAIN_2 (PS00346)    ETS_DOMAIN_3 (PS50061)    PNT (PS51433)   
Domaine pattern : Prosite (Expaxy)ETS_DOMAIN_1 (PS00345)    ETS_DOMAIN_2 (PS00346)    ETS_DOMAIN_3 (PS50061)    PNT (PS51433)   
Domains : Interpro (SRS)Ets    Pointed_dom    SAM/pointed    WHTH_trsnscrt_rep_DNA-bd   
Domains : Interpro (EBI)Ets    Pointed_dom    SAM/pointed    WHTH_trsnscrt_rep_DNA-bd   
Related proteins : CluSTrQ9Y603
Domain families : Pfam (SRS)Ets (PF00178)    SAM_PNT (PF02198)   
Domain families : Pfam (Sanger)Ets (PF00178)    SAM_PNT (PF02198)   
Domain families : Pfam (NCBI)pfam00178    pfam02198   
Domain families : Smart (EMBL)ETS (SM00413)  SAM_PNT (SM00251)  
DMDM51513
Blocks (Seattle)Q9Y603
Human Protein AtlasENSG00000010030
HPRD16095
IPIIPI00001714   IPI00221263   IPI00221264   IPI00221265   IPI00221266   IPI00221267   IPI00221268   IPI01015183   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y603
IntAct (EBI)Q9Y603
FunCoupENSG00000010030
REACTOMEETV7
Protein Interaction Database51513
BioGRIDETV7
InParanoidQ9Y603
Interologous Interaction database Q9Y603
IntegromeDBETV7
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ETV7
SNP (GeneSNP Utah)ETV7
SNP : HGBaseETV7
Genetic variants : HAPMAPETV7
Somatic Mutations in Cancer : COSMICETV7 
CONAN: Copy Number AnalysisETV7 
Mutations and Diseases : HGMDETV7
OMIM605255   
GENETests605255   
Disease Genetic AssociationETV7
Huge Navigator ETV7 [HugePedia]  ETV7 [HugeCancerGEM]
Genomic VariantsETV7  ETV7 [DGVbeta]
snp3D : Map Gene to Disease51513
General knowledge
Homologs : HomoloGeneETV7
Homology/Alignments : Family Browser (UCSC)ETV7
Phylogenetic Trees/Animal Genes : TreeFamETV7
Chemical/Protein Interactions : CTD51513
Chemical/Pharm GKB GenePA134980006
Clinical trialETV7
Cancer Resource (Charite)ENSG00000010030
Ontology : AmiGOsequence-specific DNA binding transcription factor activity  protein binding  nucleus  nucleolus  transcription from RNA polymerase II promoter  organ morphogenesis  sequence-specific DNA binding  
Ontology : EGO-EBIsequence-specific DNA binding transcription factor activity  protein binding  nucleus  nucleolus  transcription from RNA polymerase II promoter  organ morphogenesis  sequence-specific DNA binding  
Pathways : KEGGDorso-ventral axis formation
Other databases
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
PubGeneETV7
iHOPETV7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:28:31 CEST 2013
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