| Nomenclature |
|---|
| HGNC (Hugo) | ETV7 18160 |
| Cards |
|---|
| Entrez_Gene (NCBI) | ETV7 51513 ETS variant transcription factor 7 |
| Aliases | TEL-2; TEL2; TELB |
| GeneCards (Weizmann) | ETV7 |
| Ensembl hg19 (Hinxton) | ENSG00000010030 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000010030 [Gene_View] ENSG00000010030 [Sequence] chr6:36366194-36387669 [Contig_View] ETV7 [Vega] |
| ICGC DataPortal | ENSG00000010030 |
| TCGA cBioPortal | ETV7 |
| AceView (NCBI) | ETV7 |
| Genatlas (Paris) | ETV7 |
| WikiGenes | 51513 |
| SOURCE (Princeton) | ETV7 |
| Genetics Home Reference (NIH) | ETV7 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | ETV7 - chr6:36366194-36387669 - 6p21.31 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | ETV7 - 6p21.31 [Description] (hg19-Feb_2009) |
| GoldenPath | ETV7 - 6p21.31 [CytoView hg19] ETV7 - 6p21.31 [CytoView hg38] |
| ImmunoBase | ENSG00000010030 |
| Mapping of homologs : NCBI | ETV7 [Mapview hg19] ETV7 [Mapview hg38] |
| OMIM | 605255 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AF116508 AF116509 AF116510 AF147782 AF175387 |
| RefSeq transcript (Entrez) | NM_001207035 NM_001207036 NM_001207037 NM_001207038 NM_001207039 NM_001207040 NM_001207041 NM_016135 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | ETV7 |
| Alternative Splicing Gallery | ENSG00000010030 |
| Gene Expression | ETV7 [ NCBI-GEO ] ETV7 [ EBI - ARRAY_EXPRESS ]
ETV7 [ SEEK ] ETV7 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | ETV7 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 51513 |
| GTEX Portal (Tissue expression) | ETV7 |
| Human Protein Atlas | ENSG00000010030-ETV7 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q9Y603 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q9Y603 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q9Y603 |
| Splice isoforms : SwissVar | Q9Y603 |
| PhosPhoSitePlus | Q9Y603 |
| Domaine pattern : Prosite (Expaxy) | ETS_DOMAIN_2 (PS00346) ETS_DOMAIN_3 (PS50061) PNT (PS51433) |
| Domains : Interpro (EBI) | Ets_dom Pointed_dom SAM/pointed_sf WH-like_DNA-bd_sf WH_DNA-bd_sf |
| Domain families : Pfam (Sanger) | Ets (PF00178) SAM_PNT (PF02198) |
| Domain families : Pfam (NCBI) | pfam00178 pfam02198 |
| Domain families : Smart (EMBL) | ETS (SM00413) SAM_PNT (SM00251) |
| Conserved Domain (NCBI) | ETV7 |
| DMDM Disease mutations | 51513 |
| Blocks (Seattle) | ETV7 |
| Superfamily | Q9Y603 |
| Human Protein Atlas [tissue] | ENSG00000010030-ETV7 [tissue] |
| Peptide Atlas | Q9Y603 |
| HPRD | 16095 |
| IPI | IPI00001714 IPI00221263 IPI00221264 IPI00221265 IPI00221266 IPI00221267 IPI00221268 IPI01015183 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q9Y603 |
| IntAct (EBI) | Q9Y603 |
| FunCoup | ENSG00000010030 |
| BioGRID | ETV7 |
| STRING (EMBL) | ETV7 |
| ZODIAC | ETV7 |
| Ontologies - Pathways |
|---|
| QuickGO | Q9Y603 |
| Ontology : AmiGO | negative regulation of transcription by RNA polymerase II nuclear chromatin RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific protein binding nucleus nucleoplasm regulation of transcription by RNA polymerase II transcription by RNA polymerase II animal organ morphogenesis cell differentiation host cell nucleus |
| Ontology : EGO-EBI | negative regulation of transcription by RNA polymerase II nuclear chromatin RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific protein binding nucleus nucleoplasm regulation of transcription by RNA polymerase II transcription by RNA polymerase II animal organ morphogenesis cell differentiation host cell nucleus |
| Pathways : KEGG | Dorso-ventral axis formation Transcriptional misregulation in cancer |
| NDEx Network | ETV7 |
| Atlas of Cancer Signalling Network | ETV7 |
| Wikipedia pathways | ETV7 |
| Orthology - Evolution |
|---|
| OrthoDB | 51513 |
| GeneTree (enSembl) | ENSG00000010030 |
| Phylogenetic Trees/Animal Genes : TreeFam | ETV7 |
| HOGENOM | Q9Y603 |
| Homologs : HomoloGene | ETV7 |
| Homology/Alignments : Family Browser (UCSC) | ETV7 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Mitelman | KCTD20/ETV7 [6p21.31/6p21.31] [t(6;6)(p21;p21)] |
| Fusion Portal | KCTD20 6p21.31 ETV7 6p21.31 BLCA |
| Fusion : Quiver | ETV7 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | ETV7 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | ETV7 |
| dbVar | ETV7 |
| ClinVar | ETV7 |
| 1000_Genomes | ETV7 |
| Exome Variant Server | ETV7 |
| ExAC (Exome Aggregation Consortium) | ENSG00000010030 |
| GNOMAD Browser | ENSG00000010030 |
| Varsome Browser | ETV7 |
| Genetic variants : HAPMAP | 51513 |
| Genomic Variants (DGV) | ETV7 [DGVbeta] |
| DECIPHER | ETV7 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | ETV7 |
| Mutations |
|---|
| ICGC Data Portal | ETV7 |
| TCGA Data Portal | ETV7 |
| Broad Tumor Portal | ETV7 |
| OASIS Portal | ETV7 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | ETV7 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | ETV7 |
| Mutations and Diseases : HGMD | ETV7 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search ETV7 |
| DgiDB (Drug Gene Interaction Database) | ETV7 |
| DoCM (Curated mutations) | ETV7 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | ETV7 (select a term) |
| intoGen | ETV7 |
| Cancer3D | ETV7(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 605255 |
| Orphanet | |
| DisGeNET | ETV7 |
| Medgen | ETV7 |
| Genetic Testing Registry | ETV7
|
| NextProt | Q9Y603 [Medical] |
| TSGene | 51513 |
| GENETests | ETV7 |
| Target Validation | ETV7 |
| Huge Navigator |
ETV7 [HugePedia] |
| snp3D : Map Gene to Disease | 51513 |
| BioCentury BCIQ | ETV7 |
| ClinGen | ETV7 |
| Clinical trials, drugs, therapy |
|---|
| Protein Interactions : CTD | 51513 |
| Pharm GKB Gene | PA134980006 |
| Clinical trial | ETV7 |
| Miscellaneous |
|---|
| canSAR (ICR) | ETV7 (select the gene name) |
| Harmonizome | ETV7 |
| DataMed Index | ETV7 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 24 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | ETV7 |
| EVEX | ETV7 |
| GoPubMed | ETV7 |
| iHOP | ETV7 |
