Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ETV7 (ETS variant transcription factor 7)

Identity

Alias (NCBI)TEL-2
TEL2
TELB
HGNC (Hugo) ETV7
HGNC Alias symbTEL2
TEL-2
HGNC Alias nameTEL2 oncogene
HGNC Previous nameets variant gene 7 (TEL2 oncogene)
 ETS variant 7
LocusID (NCBI) 51513
Atlas_Id 40506
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 36366194 and ends at 36387669 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KCTD20 (6p21.31)::ETV7 (6p21.31)KCTD20 6p21.31::ETV7 6p21.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  dic(9;12)(p13;p13) PAX5::ETV6
t(6;17)(p21;p13)

External links

Nomenclature
HGNC (Hugo)ETV7   18160
Cards
Entrez_Gene (NCBI)ETV7    ETS variant transcription factor 7
AliasesTEL-2; TEL2; TELB
GeneCards (Weizmann)ETV7
Ensembl hg19 (Hinxton)ENSG00000010030 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000010030 [Gene_View]  ENSG00000010030 [Sequence]  chr6:36366194-36387669 [Contig_View]  ETV7 [Vega]
ICGC DataPortalENSG00000010030
TCGA cBioPortalETV7
AceView (NCBI)ETV7
Genatlas (Paris)ETV7
SOURCE (Princeton)ETV7
Genetics Home Reference (NIH)ETV7
Genomic and cartography
GoldenPath hg38 (UCSC)ETV7  -     chr6:36366194-36387669 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ETV7  -     6p21.31   [Description]    (hg19-Feb_2009)
GoldenPathETV7 - 6p21.31 [CytoView hg19]  ETV7 - 6p21.31 [CytoView hg38]
ImmunoBaseENSG00000010030
Genome Data Viewer NCBIETV7 [Mapview hg19]  
OMIM605255   
Gene and transcription
Genbank (Entrez)AF116508 AF116509 AF116510 AF147782 AF175387
RefSeq transcript (Entrez)NM_001207035 NM_001207036 NM_001207037 NM_001207038 NM_001207039 NM_001207040 NM_001207041 NM_016135
Consensus coding sequences : CCDS (NCBI)ETV7
Gene ExpressionETV7 [ NCBI-GEO ]   ETV7 [ EBI - ARRAY_EXPRESS ]   ETV7 [ SEEK ]   ETV7 [ MEM ]
Gene Expression Viewer (FireBrowse)ETV7 [ Firebrowse - Broad ]
GenevisibleExpression of ETV7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51513
GTEX Portal (Tissue expression)ETV7
Human Protein AtlasENSG00000010030-ETV7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ETV7
Human Protein Atlas [tissue]ENSG00000010030-ETV7 [tissue]
HPRD16095
Protein Interaction databases
BioGRIDETV7
STRING (EMBL)ETV7
ZODIACETV7
Ontologies - Pathways
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXETV7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jan 17 15:23:43 CET 2022
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.