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EVA1B (eva-1 homolog B)

Identity

Alias_namesC1orf78
FAM176B
chromosome 1 open reading frame 78
family with sequence similarity 176, member B
eva-1 homolog B (C. elegans)
Alias_symbol (synonym)FLJ10647
Other alias
HGNC (Hugo) EVA1B
LocusID (NCBI) 55194
Atlas_Id 62932
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 36322030 and ends at 36323648 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EVA1B   25558
Cards
Entrez_Gene (NCBI)EVA1B  55194  eva-1 homolog B
AliasesC1orf78; FAM176B
GeneCards (Weizmann)EVA1B
Ensembl hg19 (Hinxton)ENSG00000142694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142694 [Gene_View]  chr1:36322030-36323648 [Contig_View]  EVA1B [Vega]
ICGC DataPortalENSG00000142694
TCGA cBioPortalEVA1B
AceView (NCBI)EVA1B
Genatlas (Paris)EVA1B
WikiGenes55194
SOURCE (Princeton)EVA1B
Genetics Home Reference (NIH)EVA1B
Genomic and cartography
GoldenPath hg38 (UCSC)EVA1B  -     chr1:36322030-36323648 -  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EVA1B  -     1p34.3   [Description]    (hg19-Feb_2009)
EnsemblEVA1B - 1p34.3 [CytoView hg19]  EVA1B - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBIEVA1B [Mapview hg19]  EVA1B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI829867 AK001509 BC006241 BC071697 BI193341
RefSeq transcript (Entrez)NM_001304762 NM_018166
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EVA1B
Cluster EST : UnigeneHs.87016 [ NCBI ]
CGAP (NCI)Hs.87016
Alternative Splicing GalleryENSG00000142694
Gene ExpressionEVA1B [ NCBI-GEO ]   EVA1B [ EBI - ARRAY_EXPRESS ]   EVA1B [ SEEK ]   EVA1B [ MEM ]
Gene Expression Viewer (FireBrowse)EVA1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55194
GTEX Portal (Tissue expression)EVA1B
Human Protein AtlasENSG00000142694-EVA1B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVM1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVM1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVM1
Splice isoforms : SwissVarQ9NVM1
PhosPhoSitePlusQ9NVM1
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EVA1B
DMDM Disease mutations55194
Blocks (Seattle)EVA1B
SuperfamilyQ9NVM1
Human Protein Atlas [tissue]ENSG00000142694-EVA1B [tissue]
Peptide AtlasQ9NVM1
HPRD07690
IPIIPI00018801   
Protein Interaction databases
DIP (DOE-UCLA)Q9NVM1
IntAct (EBI)Q9NVM1
FunCoupENSG00000142694
BioGRIDEVA1B
STRING (EMBL)EVA1B
ZODIACEVA1B
Ontologies - Pathways
QuickGOQ9NVM1
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkEVA1B
Atlas of Cancer Signalling NetworkEVA1B
Wikipedia pathwaysEVA1B
Orthology - Evolution
OrthoDB55194
GeneTree (enSembl)ENSG00000142694
Phylogenetic Trees/Animal Genes : TreeFamEVA1B
HOVERGENQ9NVM1
HOGENOMQ9NVM1
Homologs : HomoloGeneEVA1B
Homology/Alignments : Family Browser (UCSC)EVA1B
Gene fusions - Rearrangements
Tumor Fusion PortalEVA1B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVA1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVA1B
dbVarEVA1B
ClinVarEVA1B
1000_GenomesEVA1B 
Exome Variant ServerEVA1B
ExAC (Exome Aggregation Consortium)ENSG00000142694
GNOMAD BrowserENSG00000142694
Genetic variants : HAPMAP55194
Genomic Variants (DGV)EVA1B [DGVbeta]
DECIPHEREVA1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEVA1B 
Mutations
ICGC Data PortalEVA1B 
TCGA Data PortalEVA1B 
Broad Tumor PortalEVA1B
OASIS PortalEVA1B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDEVA1B
BioMutasearch EVA1B
DgiDB (Drug Gene Interaction Database)EVA1B
DoCM (Curated mutations)EVA1B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EVA1B (select a term)
intoGenEVA1B
Cancer3DEVA1B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETEVA1B
MedgenEVA1B
Genetic Testing Registry EVA1B
NextProtQ9NVM1 [Medical]
TSGene55194
GENETestsEVA1B
Target ValidationEVA1B
Huge Navigator
snp3D : Map Gene to Disease55194
BioCentury BCIQEVA1B
ClinGenEVA1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55194
Chemical/Pharm GKB GenePA162387367
Clinical trialEVA1B
Miscellaneous
canSAR (ICR)EVA1B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEVA1B
EVEXEVA1B
GoPubMedEVA1B
iHOPEVA1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:00:02 CET 2017

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