Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EVA1C (eva-1 homolog C)

Identity

Alias (NCBI)B18
B19
C21orf63
C21orf64
FAM176C
PRED34
SUE21
HGNC (Hugo) EVA1C
HGNC Alias symbB18
PRED34
B19
HGNC Previous nameC21orf64
 C21orf63
 FAM176C
HGNC Previous namechromosome 21 open reading frame 64
 chromosome 21 open reading frame 63
 family with sequence similarity 176, member C
 eva-1 homolog C (C. elegans)
LocusID (NCBI) 59271
Atlas_Id 62933
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 32412706 and ends at 32515387 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EVA1C (21q22.11) / CBR3 (21q22.12)EVA1C (21q22.11) / CEP112 (17q24.1)EVA1C (21q22.11) / MRAP (21q22.11)
EVA1C (21q22.11) / MROH8 (20q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)EVA1C   13239
Cards
Entrez_Gene (NCBI)EVA1C    eva-1 homolog C
AliasesB18; B19; C21orf63; C21orf64; 
FAM176C; PRED34; SUE21
GeneCards (Weizmann)EVA1C
Ensembl hg19 (Hinxton)ENSG00000166979 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166979 [Gene_View]  ENSG00000166979 [Sequence]  chr21:32412706-32515387 [Contig_View]  EVA1C [Vega]
ICGC DataPortalENSG00000166979
TCGA cBioPortalEVA1C
AceView (NCBI)EVA1C
Genatlas (Paris)EVA1C
SOURCE (Princeton)EVA1C
Genetics Home Reference (NIH)EVA1C
Genomic and cartography
GoldenPath hg38 (UCSC)EVA1C  -     chr21:32412706-32515387 +  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EVA1C  -     21q22.11   [Description]    (hg19-Feb_2009)
GoldenPathEVA1C - 21q22.11 [CytoView hg19]  EVA1C - 21q22.11 [CytoView hg38]
ImmunoBaseENSG00000166979
Genome Data Viewer NCBIEVA1C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF358258 AI093702 AI290677 AK125013 AK126660
RefSeq transcript (Entrez)NM_001286556 NM_001320744 NM_001320745 NM_058187
Consensus coding sequences : CCDS (NCBI)EVA1C
Gene ExpressionEVA1C [ NCBI-GEO ]   EVA1C [ EBI - ARRAY_EXPRESS ]   EVA1C [ SEEK ]   EVA1C [ MEM ]
Gene Expression Viewer (FireBrowse)EVA1C [ Firebrowse - Broad ]
GenevisibleExpression of EVA1C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)59271
GTEX Portal (Tissue expression)EVA1C
Human Protein AtlasENSG00000166979-EVA1C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP58658   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP58658  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP58658
PhosPhoSitePlusP58658
Domaine pattern : Prosite (Expaxy)SUEL_LECTIN (PS50228)   
Domains : Interpro (EBI)EVA1_dom    Lectin_gal-bd_dom    Lectin_gal-bd_sf   
Domain families : Pfam (Sanger)FAM176 (PF14851)    Gal_Lectin (PF02140)   
Domain families : Pfam (NCBI)pfam14851    pfam02140   
Conserved Domain (NCBI)EVA1C
SuperfamilyP58658
AlphaFold pdb e-kbP58658   
Human Protein Atlas [tissue]ENSG00000166979-EVA1C [tissue]
HPRD10760
Protein Interaction databases
DIP (DOE-UCLA)P58658
IntAct (EBI)P58658
BioGRIDEVA1C
STRING (EMBL)EVA1C
ZODIACEVA1C
Ontologies - Pathways
QuickGOP58658
Ontology : AmiGOextracellular region  extracellular region  biological_process  heparin binding  heparin binding  integral component of membrane  carbohydrate binding  
Ontology : EGO-EBIextracellular region  extracellular region  biological_process  heparin binding  heparin binding  integral component of membrane  carbohydrate binding  
NDEx NetworkEVA1C
Atlas of Cancer Signalling NetworkEVA1C
Wikipedia pathwaysEVA1C
Orthology - Evolution
OrthoDB59271
GeneTree (enSembl)ENSG00000166979
Phylogenetic Trees/Animal Genes : TreeFamEVA1C
Homologs : HomoloGeneEVA1C
Homology/Alignments : Family Browser (UCSC)EVA1C
Gene fusions - Rearrangements
Fusion : QuiverEVA1C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVA1C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVA1C
dbVarEVA1C
ClinVarEVA1C
MonarchEVA1C
1000_GenomesEVA1C 
Exome Variant ServerEVA1C
GNOMAD BrowserENSG00000166979
Varsome BrowserEVA1C
ACMGEVA1C variants
VarityP58658
Genomic Variants (DGV)EVA1C [DGVbeta]
DECIPHEREVA1C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEVA1C 
Mutations
ICGC Data PortalEVA1C 
TCGA Data PortalEVA1C 
Broad Tumor PortalEVA1C
OASIS PortalEVA1C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEVA1C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DEVA1C
Mutations and Diseases : HGMDEVA1C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaEVA1C
DgiDB (Drug Gene Interaction Database)EVA1C
DoCM (Curated mutations)EVA1C
CIViC (Clinical Interpretations of Variants in Cancer)EVA1C
Cancer3DEVA1C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETEVA1C
MedgenEVA1C
Genetic Testing Registry EVA1C
NextProtP58658 [Medical]
GENETestsEVA1C
Target ValidationEVA1C
Huge Navigator EVA1C [HugePedia]
ClinGenEVA1C
Clinical trials, drugs, therapy
MyCancerGenomeEVA1C
Protein Interactions : CTDEVA1C
Pharm GKB GenePA25858
PharosP58658
Clinical trialEVA1C
Miscellaneous
canSAR (ICR)EVA1C
HarmonizomeEVA1C
DataMed IndexEVA1C
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXEVA1C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:49:17 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.