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EVA1C (eva-1 homolog C)

Identity

Alias_namesC21orf64
C21orf63
FAM176C
chromosome 21 open reading frame 64
chromosome 21 open reading frame 63
family with sequence similarity 176, member C
eva-1 homolog C (C. elegans)
Alias_symbol (synonym)B18
PRED34
B19
Other aliasSUE21
HGNC (Hugo) EVA1C
LocusID (NCBI) 59271
Atlas_Id 62933
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 32412437 and ends at 32515400 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EVA1C (21q22.11) / CBR3 (21q22.12)EVA1C (21q22.11) / CEP112 (17q24.1)EVA1C (21q22.11) / MRAP (21q22.11)
EVA1C (21q22.11) / MROH8 (20q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EVA1C   13239
Cards
Entrez_Gene (NCBI)EVA1C  59271  eva-1 homolog C
AliasesB18; B19; C21orf63; C21orf64; 
FAM176C; PRED34; SUE21
GeneCards (Weizmann)EVA1C
Ensembl hg19 (Hinxton)ENSG00000166979 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166979 [Gene_View]  chr21:32412437-32515400 [Contig_View]  EVA1C [Vega]
ICGC DataPortalENSG00000166979
TCGA cBioPortalEVA1C
AceView (NCBI)EVA1C
Genatlas (Paris)EVA1C
WikiGenes59271
SOURCE (Princeton)EVA1C
Genetics Home Reference (NIH)EVA1C
Genomic and cartography
GoldenPath hg38 (UCSC)EVA1C  -     chr21:32412437-32515400 +  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EVA1C  -     21q22.11   [Description]    (hg19-Feb_2009)
EnsemblEVA1C - 21q22.11 [CytoView hg19]  EVA1C - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBIEVA1C [Mapview hg19]  EVA1C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF358258 AI093702 AI290677 AK125013 AK126660
RefSeq transcript (Entrez)NM_001286556 NM_001320744 NM_001320745 NM_058187
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EVA1C
Cluster EST : UnigeneHs.208358 [ NCBI ]
CGAP (NCI)Hs.208358
Alternative Splicing GalleryENSG00000166979
Gene ExpressionEVA1C [ NCBI-GEO ]   EVA1C [ EBI - ARRAY_EXPRESS ]   EVA1C [ SEEK ]   EVA1C [ MEM ]
Gene Expression Viewer (FireBrowse)EVA1C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)59271
GTEX Portal (Tissue expression)EVA1C
Protein : pattern, domain, 3D structure
UniProt/SwissProtP58658   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP58658  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP58658
Splice isoforms : SwissVarP58658
PhosPhoSitePlusP58658
Domaine pattern : Prosite (Expaxy)SUEL_LECTIN (PS50228)   
Domains : Interpro (EBI)Lectin_gal-bd_dom   
Domain families : Pfam (Sanger)Gal_Lectin (PF02140)   
Domain families : Pfam (NCBI)pfam02140   
Conserved Domain (NCBI)EVA1C
DMDM Disease mutations59271
Blocks (Seattle)EVA1C
SuperfamilyP58658
Human Protein AtlasENSG00000166979
Peptide AtlasP58658
HPRD10760
IPIIPI00068068   IPI00445057   IPI00976081   IPI00657745   IPI00853515   IPI00878989   IPI00219988   IPI00894506   
Protein Interaction databases
DIP (DOE-UCLA)P58658
IntAct (EBI)P58658
FunCoupENSG00000166979
BioGRIDEVA1C
STRING (EMBL)EVA1C
ZODIACEVA1C
Ontologies - Pathways
QuickGOP58658
Ontology : AmiGOintegral component of membrane  carbohydrate binding  
Ontology : EGO-EBIintegral component of membrane  carbohydrate binding  
NDEx NetworkEVA1C
Atlas of Cancer Signalling NetworkEVA1C
Wikipedia pathwaysEVA1C
Orthology - Evolution
OrthoDB59271
GeneTree (enSembl)ENSG00000166979
Phylogenetic Trees/Animal Genes : TreeFamEVA1C
HOVERGENP58658
HOGENOMP58658
Homologs : HomoloGeneEVA1C
Homology/Alignments : Family Browser (UCSC)EVA1C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVA1C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVA1C
dbVarEVA1C
ClinVarEVA1C
1000_GenomesEVA1C 
Exome Variant ServerEVA1C
ExAC (Exome Aggregation Consortium)EVA1C (select the gene name)
Genetic variants : HAPMAP59271
Genomic Variants (DGV)EVA1C [DGVbeta]
DECIPHEREVA1C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEVA1C 
Mutations
ICGC Data PortalEVA1C 
TCGA Data PortalEVA1C 
Broad Tumor PortalEVA1C
OASIS PortalEVA1C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDEVA1C
BioMutasearch EVA1C
DgiDB (Drug Gene Interaction Database)EVA1C
DoCM (Curated mutations)EVA1C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EVA1C (select a term)
intoGenEVA1C
Cancer3DEVA1C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEVA1C
Genetic Testing Registry EVA1C
NextProtP58658 [Medical]
TSGene59271
GENETestsEVA1C
Huge Navigator EVA1C [HugePedia]
snp3D : Map Gene to Disease59271
BioCentury BCIQEVA1C
ClinGenEVA1C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD59271
Chemical/Pharm GKB GenePA25858
Clinical trialEVA1C
Miscellaneous
canSAR (ICR)EVA1C (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEVA1C
EVEXEVA1C
GoPubMedEVA1C
iHOPEVA1C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:10:14 CEST 2017

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