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EVI2A (ecotropic viral integration site 2A)

Identity

Alias_namesEVI2
Alias_symbol (synonym)EVDA
Other aliasEVI-2A
HGNC (Hugo) EVI2A
LocusID (NCBI) 2123
Atlas_Id 40509
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 31316410 and ends at 31321749 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NF1 (17q11.2) / EVI2A (17q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Head and Neck: Iris Hamartomas


External links

Nomenclature
HGNC (Hugo)EVI2A   3499
Cards
Entrez_Gene (NCBI)EVI2A  2123  ecotropic viral integration site 2A
AliasesEVDA; EVI-2A; EVI2
GeneCards (Weizmann)EVI2A
Ensembl hg19 (Hinxton)ENSG00000126860 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000126860 [Gene_View]  chr17:31316410-31321749 [Contig_View]  EVI2A [Vega]
ICGC DataPortalENSG00000126860
TCGA cBioPortalEVI2A
AceView (NCBI)EVI2A
Genatlas (Paris)EVI2A
WikiGenes2123
SOURCE (Princeton)EVI2A
Genetics Home Reference (NIH)EVI2A
Genomic and cartography
GoldenPath hg38 (UCSC)EVI2A  -     chr17:31316410-31321749 -  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EVI2A  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblEVI2A - 17q11.2 [CytoView hg19]  EVI2A - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIEVI2A [Mapview hg19]  EVI2A [Mapview hg38]
OMIM158380   
Gene and transcription
Genbank (Entrez)AK295311 AK312348 AV724051 BC035572 BG699778
RefSeq transcript (Entrez)NM_001003927 NM_014210
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EVI2A
Cluster EST : UnigeneHs.591198 [ NCBI ]
CGAP (NCI)Hs.591198
Alternative Splicing GalleryENSG00000126860
Gene ExpressionEVI2A [ NCBI-GEO ]   EVI2A [ EBI - ARRAY_EXPRESS ]   EVI2A [ SEEK ]   EVI2A [ MEM ]
Gene Expression Viewer (FireBrowse)EVI2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2123
GTEX Portal (Tissue expression)EVI2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtP22794   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP22794  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP22794
Splice isoforms : SwissVarP22794
PhosPhoSitePlusP22794
Domains : Interpro (EBI)Ectropic_vir_integratn_site_2A   
Domain families : Pfam (Sanger)EVI2A (PF05399)   
Domain families : Pfam (NCBI)pfam05399   
Domain structure : Prodom (Prabi Lyon)EVI_S2A (PD037847)   
Conserved Domain (NCBI)EVI2A
DMDM Disease mutations2123
Blocks (Seattle)EVI2A
SuperfamilyP22794
Human Protein AtlasENSG00000126860
Peptide AtlasP22794
HPRD08866
IPIIPI00027506   IPI00456226   IPI00946886   
Protein Interaction databases
DIP (DOE-UCLA)P22794
IntAct (EBI)P22794
FunCoupENSG00000126860
BioGRIDEVI2A
STRING (EMBL)EVI2A
ZODIACEVI2A
Ontologies - Pathways
QuickGOP22794
Ontology : AmiGOtransmembrane signaling receptor activity  signal transduction  integral component of membrane  
Ontology : EGO-EBItransmembrane signaling receptor activity  signal transduction  integral component of membrane  
NDEx NetworkEVI2A
Atlas of Cancer Signalling NetworkEVI2A
Wikipedia pathwaysEVI2A
Orthology - Evolution
OrthoDB2123
GeneTree (enSembl)ENSG00000126860
Phylogenetic Trees/Animal Genes : TreeFamEVI2A
HOVERGENP22794
HOGENOMP22794
Homologs : HomoloGeneEVI2A
Homology/Alignments : Family Browser (UCSC)EVI2A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVI2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVI2A
dbVarEVI2A
ClinVarEVI2A
1000_GenomesEVI2A 
Exome Variant ServerEVI2A
ExAC (Exome Aggregation Consortium)EVI2A (select the gene name)
Genetic variants : HAPMAP2123
Genomic Variants (DGV)EVI2A [DGVbeta]
DECIPHEREVI2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEVI2A 
Mutations
ICGC Data PortalEVI2A 
TCGA Data PortalEVI2A 
Broad Tumor PortalEVI2A
OASIS PortalEVI2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEVI2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEVI2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EVI2A
DgiDB (Drug Gene Interaction Database)EVI2A
DoCM (Curated mutations)EVI2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EVI2A (select a term)
intoGenEVI2A
Cancer3DEVI2A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM158380   
Orphanet
MedgenEVI2A
Genetic Testing Registry EVI2A
NextProtP22794 [Medical]
TSGene2123
GENETestsEVI2A
Target ValidationEVI2A
Huge Navigator EVI2A [HugePedia]
snp3D : Map Gene to Disease2123
BioCentury BCIQEVI2A
ClinGenEVI2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2123
Chemical/Pharm GKB GenePA27913
Clinical trialEVI2A
Miscellaneous
canSAR (ICR)EVI2A (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEVI2A
EVEXEVI2A
GoPubMedEVI2A
iHOPEVI2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:32:59 CEST 2017

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