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EVI2B (ecotropic viral integration site 2B)

Identity

Other namesCD361
D17S376
EVDB
HGNC (Hugo) EVI2B
LocusID (NCBI) 2124
Location 17q11.2
Location_base_pair Starts at 29630788 and ends at 29641130 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EVI2B   3500
Cards
Entrez_Gene (NCBI)EVI2B  2124  ecotropic viral integration site 2B
GeneCards (Weizmann)EVI2B
Ensembl hg19 (Hinxton)ENSG00000185862 [Gene_View]  chr17:29630788-29641130 [Contig_View]  EVI2B [Vega]
Ensembl hg38 (Hinxton)ENSG00000185862 [Gene_View]  chr17:29630788-29641130 [Contig_View]  EVI2B [Vega]
ICGC DataPortalENSG00000185862
cBioPortalEVI2B
AceView (NCBI)EVI2B
Genatlas (Paris)EVI2B
WikiGenes2124
SOURCE (Princeton)EVI2B
Genomic and cartography
GoldenPath hg19 (UCSC)EVI2B  -     chr17:29630788-29641130 -  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EVI2B  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblEVI2B - 17q11.2 [CytoView hg19]  EVI2B - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIEVI2B [Mapview hg19]  EVI2B [Mapview hg38]
OMIM158381   
Gene and transcription
Genbank (Entrez)AA251185 AK297087 AK312822 AW576194 BC005926
RefSeq transcript (Entrez)NM_006495
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NG_009018 NT_010783 NW_001838430 NW_004929407
Consensus coding sequences : CCDS (NCBI)EVI2B
Cluster EST : UnigeneHs.5509 [ NCBI ]
CGAP (NCI)Hs.5509
Alternative Splicing : Fast-db (Paris)GSHG0013246
Alternative Splicing GalleryENSG00000185862
Gene ExpressionEVI2B [ NCBI-GEO ]     EVI2B [ SEEK ]   EVI2B [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP34910 (Uniprot)
NextProtP34910  [Medical]
With graphics : InterProP34910
Splice isoforms : SwissVarP34910 (Swissvar)
Related proteins : CluSTrP34910
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations2124
Blocks (Seattle)P34910
Human Protein AtlasENSG00000185862
Peptide AtlasP34910
HPRD08867
IPIIPI01014207   IPI00921805   
Protein Interaction databases
DIP (DOE-UCLA)P34910
IntAct (EBI)P34910
FunCoupENSG00000185862
BioGRIDEVI2B
IntegromeDBEVI2B
STRING (EMBL)EVI2B
Ontologies - Pathways
QuickGOP34910
Ontology : AmiGOintegral component of plasma membrane  
Ontology : EGO-EBIintegral component of plasma membrane  
Protein Interaction DatabaseEVI2B
DoCM (Curated mutations)EVI2B
Wikipedia pathwaysEVI2B
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerEVI2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVI2B
dbVarEVI2B
ClinVarEVI2B
1000_GenomesEVI2B 
Exome Variant ServerEVI2B
SNP (GeneSNP Utah)EVI2B
SNP : HGBaseEVI2B
Genetic variants : HAPMAPEVI2B
Genomic VariantsEVI2B  EVI2B [DGVbeta]
Mutations
ICGC Data PortalENSG00000185862 
Somatic Mutations in Cancer : COSMICEVI2B 
CONAN: Copy Number AnalysisEVI2B 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)17:29630788-29641130
Mutations and Diseases : HGMDEVI2B
OMIM158381   
MedgenEVI2B
NextProtP34910 [Medical]
GENETestsEVI2B
Disease Genetic AssociationEVI2B
Huge Navigator EVI2B [HugePedia]  EVI2B [HugeCancerGEM]
snp3D : Map Gene to Disease2124
DGIdb (Drug Gene Interaction db)EVI2B
General knowledge
Homologs : HomoloGeneEVI2B
Homology/Alignments : Family Browser (UCSC)EVI2B
Phylogenetic Trees/Animal Genes : TreeFamEVI2B
Chemical/Protein Interactions : CTD2124
Chemical/Pharm GKB GenePA27914
Clinical trialEVI2B
Cancer Resource (Charite)ENSG00000185862
Other databases
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
CoreMineEVI2B
GoPubMedEVI2B
iHOPEVI2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 20 21:25:11 CET 2014

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