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EVI5L (ecotropic viral integration site 5 like)

Identity

Other alias-
HGNC (Hugo) EVI5L
LocusID (NCBI) 115704
Atlas_Id 56526
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7911386 and ends at 7929862 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
EVI5L (19p13.2) / VAV1 (19p13.3)LRRC8E (19p13.2) / EVI5L (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EVI5L   30464
Cards
Entrez_Gene (NCBI)EVI5L  115704  ecotropic viral integration site 5 like
Aliases
GeneCards (Weizmann)EVI5L
Ensembl hg19 (Hinxton)ENSG00000142459 [Gene_View]  chr19:7911386-7929862 [Contig_View]  EVI5L [Vega]
Ensembl hg38 (Hinxton)ENSG00000142459 [Gene_View]  chr19:7911386-7929862 [Contig_View]  EVI5L [Vega]
ICGC DataPortalENSG00000142459
TCGA cBioPortalEVI5L
AceView (NCBI)EVI5L
Genatlas (Paris)EVI5L
WikiGenes115704
SOURCE (Princeton)EVI5L
Genetics Home Reference (NIH)EVI5L
Genomic and cartography
GoldenPath hg19 (UCSC)EVI5L  -     chr19:7911386-7929862 +  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EVI5L  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblEVI5L - 19p13.2 [CytoView hg19]  EVI5L - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIEVI5L [Mapview hg19]  EVI5L [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001159944 NM_145245
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EVI5L
Cluster EST : UnigeneHs.26870 [ NCBI ]
CGAP (NCI)Hs.26870
Alternative Splicing GalleryENSG00000142459
Gene ExpressionEVI5L [ NCBI-GEO ]   EVI5L [ EBI - ARRAY_EXPRESS ]   EVI5L [ SEEK ]   EVI5L [ MEM ]
Gene Expression Viewer (FireBrowse)EVI5L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115704
GTEX Portal (Tissue expression)EVI5L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96CN4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96CN4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96CN4
Splice isoforms : SwissVarQ96CN4
PhosPhoSitePlusQ96CN4
Domaine pattern : Prosite (Expaxy)TBC_RABGAP (PS50086)   
Domains : Interpro (EBI)Rab-GTPase-TBC_dom   
Domain families : Pfam (Sanger)RabGAP-TBC (PF00566)   
Domain families : Pfam (NCBI)pfam00566   
Domain families : Smart (EMBL)TBC (SM00164)  
Conserved Domain (NCBI)EVI5L
DMDM Disease mutations115704
Blocks (Seattle)EVI5L
SuperfamilyQ96CN4
Human Protein AtlasENSG00000142459
Peptide AtlasQ96CN4
HPRD10044
IPIIPI00060473   IPI00930364   IPI00980314   
Protein Interaction databases
DIP (DOE-UCLA)Q96CN4
IntAct (EBI)Q96CN4
FunCoupENSG00000142459
BioGRIDEVI5L
STRING (EMBL)EVI5L
ZODIACEVI5L
Ontologies - Pathways
QuickGOQ96CN4
Ontology : AmiGOGTPase activator activity  intracellular  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  negative regulation of cilium assembly  
Ontology : EGO-EBIGTPase activator activity  intracellular  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  activation of GTPase activity  negative regulation of cilium assembly  
NDEx NetworkEVI5L
Atlas of Cancer Signalling NetworkEVI5L
Wikipedia pathwaysEVI5L
Orthology - Evolution
OrthoDB115704
GeneTree (enSembl)ENSG00000142459
Phylogenetic Trees/Animal Genes : TreeFamEVI5L
HOVERGENQ96CN4
HOGENOMQ96CN4
Homologs : HomoloGeneEVI5L
Homology/Alignments : Family Browser (UCSC)EVI5L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVI5L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVI5L
dbVarEVI5L
ClinVarEVI5L
1000_GenomesEVI5L 
Exome Variant ServerEVI5L
ExAC (Exome Aggregation Consortium)EVI5L (select the gene name)
Genetic variants : HAPMAP115704
Genomic Variants (DGV)EVI5L [DGVbeta]
DECIPHER (Syndromes)19:7911386-7929862  ENSG00000142459
CONAN: Copy Number AnalysisEVI5L 
Mutations
ICGC Data PortalEVI5L 
TCGA Data PortalEVI5L 
Broad Tumor PortalEVI5L
OASIS PortalEVI5L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEVI5L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEVI5L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EVI5L
DgiDB (Drug Gene Interaction Database)EVI5L
DoCM (Curated mutations)EVI5L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EVI5L (select a term)
intoGenEVI5L
Cancer3DEVI5L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEVI5L
Genetic Testing Registry EVI5L
NextProtQ96CN4 [Medical]
TSGene115704
GENETestsEVI5L
Huge Navigator EVI5L [HugePedia]
snp3D : Map Gene to Disease115704
BioCentury BCIQEVI5L
ClinGenEVI5L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115704
Chemical/Pharm GKB GenePA134905968
Clinical trialEVI5L
Miscellaneous
canSAR (ICR)EVI5L (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEVI5L
EVEXEVI5L
GoPubMedEVI5L
iHOPEVI5L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:05:06 CET 2017

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