Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EVX2 (even-skipped homeobox 2)

Identity

Alias_nameseve, even-skipped homeobox homolog 2 (Drosophila)
Other aliasEVX-2
HGNC (Hugo) EVX2
LocusID (NCBI) 344191
Atlas_Id 62939
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 176944835 and ends at 176948690 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EVX2   3507
Cards
Entrez_Gene (NCBI)EVX2  344191  even-skipped homeobox 2
AliasesEVX-2
GeneCards (Weizmann)EVX2
Ensembl hg19 (Hinxton)ENSG00000174279 [Gene_View]  chr2:176944835-176948690 [Contig_View]  EVX2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000174279 [Gene_View]  chr2:176944835-176948690 [Contig_View]  EVX2 [Vega]
ICGC DataPortalENSG00000174279
TCGA cBioPortalEVX2
AceView (NCBI)EVX2
Genatlas (Paris)EVX2
WikiGenes344191
SOURCE (Princeton)EVX2
Genetics Home Reference (NIH)EVX2
Genomic and cartography
GoldenPath hg19 (UCSC)EVX2  -     chr2:176944835-176948690 -  2q31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)EVX2  -     2q31.1   [Description]    (hg38-Dec_2013)
EnsemblEVX2 - 2q31.1 [CytoView hg19]  EVX2 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIEVX2 [Mapview hg19]  EVX2 [Mapview hg38]
OMIM142991   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001080458
RefSeq genomic (Entrez)NC_000002 NC_018913 NG_012893 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)EVX2
Cluster EST : UnigeneHs.452341 [ NCBI ]
CGAP (NCI)Hs.452341
Alternative Splicing GalleryENSG00000174279
Gene ExpressionEVX2 [ NCBI-GEO ]   EVX2 [ EBI - ARRAY_EXPRESS ]   EVX2 [ SEEK ]   EVX2 [ MEM ]
Gene Expression Viewer (FireBrowse)EVX2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)344191
GTEX Portal (Tissue expression)EVX2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ03828   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ03828  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ03828
Splice isoforms : SwissVarQ03828
PhosPhoSitePlusQ03828
Domaine pattern : Prosite (Expaxy)HOMEOBOX_1 (PS00027)    HOMEOBOX_2 (PS50071)   
Domains : Interpro (EBI)Homeobox_CS    Homeobox_dom    Homeobox_metazoa    Homeodomain-like   
Domain families : Pfam (Sanger)Homeobox (PF00046)   
Domain families : Pfam (NCBI)pfam00046   
Domain families : Smart (EMBL)HOX (SM00389)  
Conserved Domain (NCBI)EVX2
DMDM Disease mutations344191
Blocks (Seattle)EVX2
SuperfamilyQ03828
Human Protein AtlasENSG00000174279
Peptide AtlasQ03828
IPIIPI00012495   
Protein Interaction databases
DIP (DOE-UCLA)Q03828
IntAct (EBI)Q03828
FunCoupENSG00000174279
BioGRIDEVX2
STRING (EMBL)EVX2
ZODIACEVX2
Ontologies - Pathways
QuickGOQ03828
Ontology : AmiGOnucleoplasm  regulation of transcription, DNA-templated  biological_process  limb morphogenesis  sequence-specific DNA binding  
Ontology : EGO-EBInucleoplasm  regulation of transcription, DNA-templated  biological_process  limb morphogenesis  sequence-specific DNA binding  
NDEx NetworkEVX2
Atlas of Cancer Signalling NetworkEVX2
Wikipedia pathwaysEVX2
Orthology - Evolution
OrthoDB344191
GeneTree (enSembl)ENSG00000174279
Phylogenetic Trees/Animal Genes : TreeFamEVX2
HOVERGENQ03828
HOGENOMQ03828
Homologs : HomoloGeneEVX2
Homology/Alignments : Family Browser (UCSC)EVX2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEVX2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EVX2
dbVarEVX2
ClinVarEVX2
1000_GenomesEVX2 
Exome Variant ServerEVX2
ExAC (Exome Aggregation Consortium)EVX2 (select the gene name)
Genetic variants : HAPMAP344191
Genomic Variants (DGV)EVX2 [DGVbeta]
DECIPHER (Syndromes)2:176944835-176948690  ENSG00000174279
CONAN: Copy Number AnalysisEVX2 
Mutations
ICGC Data PortalEVX2 
TCGA Data PortalEVX2 
Broad Tumor PortalEVX2
OASIS PortalEVX2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEVX2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEVX2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EVX2
DgiDB (Drug Gene Interaction Database)EVX2
DoCM (Curated mutations)EVX2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EVX2 (select a term)
intoGenEVX2
Cancer3DEVX2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM142991   
Orphanet
MedgenEVX2
Genetic Testing Registry EVX2
NextProtQ03828 [Medical]
TSGene344191
GENETestsEVX2
Huge Navigator EVX2 [HugePedia]
snp3D : Map Gene to Disease344191
BioCentury BCIQEVX2
ClinGenEVX2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD344191
Chemical/Pharm GKB GenePA27920
Clinical trialEVX2
Miscellaneous
canSAR (ICR)EVX2 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEVX2
EVEXEVX2
GoPubMedEVX2
iHOPEVX2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:03:14 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.