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EXOC3L4 (exocyst complex component 3 like 4)

Identity

Alias_namesC14orf73
chromosome 14 open reading frame 73
Other alias
HGNC (Hugo) EXOC3L4
LocusID (NCBI) 91828
Atlas_Id 62944
Location 14q32.32  [Link to chromosome band 14q32]
Location_base_pair Starts at 103100144 and ends at 103110557 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EXOC3L4   20120
Cards
Entrez_Gene (NCBI)EXOC3L4  91828  exocyst complex component 3 like 4
AliasesC14orf73
GeneCards (Weizmann)EXOC3L4
Ensembl hg19 (Hinxton)ENSG00000205436 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205436 [Gene_View]  chr14:103100144-103110557 [Contig_View]  EXOC3L4 [Vega]
ICGC DataPortalENSG00000205436
TCGA cBioPortalEXOC3L4
AceView (NCBI)EXOC3L4
Genatlas (Paris)EXOC3L4
WikiGenes91828
SOURCE (Princeton)EXOC3L4
Genetics Home Reference (NIH)EXOC3L4
Genomic and cartography
GoldenPath hg38 (UCSC)EXOC3L4  -     chr14:103100144-103110557 +  14q32.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EXOC3L4  -     14q32.32   [Description]    (hg19-Feb_2009)
EnsemblEXOC3L4 - 14q32.32 [CytoView hg19]  EXOC3L4 - 14q32.32 [CytoView hg38]
Mapping of homologs : NCBIEXOC3L4 [Mapview hg19]  EXOC3L4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000671 BC113655 BC117375 BX279908 HQ258590
RefSeq transcript (Entrez)NM_001077594
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EXOC3L4
Cluster EST : UnigeneHs.37712 [ NCBI ]
CGAP (NCI)Hs.37712
Alternative Splicing GalleryENSG00000205436
Gene ExpressionEXOC3L4 [ NCBI-GEO ]   EXOC3L4 [ EBI - ARRAY_EXPRESS ]   EXOC3L4 [ SEEK ]   EXOC3L4 [ MEM ]
Gene Expression Viewer (FireBrowse)EXOC3L4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91828
GTEX Portal (Tissue expression)EXOC3L4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ17RC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ17RC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ17RC7
Splice isoforms : SwissVarQ17RC7
PhosPhoSitePlusQ17RC7
Domains : Interpro (EBI)EXOC3/Sec6   
Domain families : Pfam (Sanger)Sec6 (PF06046)   
Domain families : Pfam (NCBI)pfam06046   
Conserved Domain (NCBI)EXOC3L4
DMDM Disease mutations91828
Blocks (Seattle)EXOC3L4
SuperfamilyQ17RC7
Human Protein AtlasENSG00000205436
Peptide AtlasQ17RC7
IPIIPI00073442   
Protein Interaction databases
DIP (DOE-UCLA)Q17RC7
IntAct (EBI)Q17RC7
FunCoupENSG00000205436
BioGRIDEXOC3L4
STRING (EMBL)EXOC3L4
ZODIACEXOC3L4
Ontologies - Pathways
QuickGOQ17RC7
Ontology : AmiGOexocyst  SNARE binding  exocytosis  exocyst localization  
Ontology : EGO-EBIexocyst  SNARE binding  exocytosis  exocyst localization  
NDEx NetworkEXOC3L4
Atlas of Cancer Signalling NetworkEXOC3L4
Wikipedia pathwaysEXOC3L4
Orthology - Evolution
OrthoDB91828
GeneTree (enSembl)ENSG00000205436
Phylogenetic Trees/Animal Genes : TreeFamEXOC3L4
HOVERGENQ17RC7
HOGENOMQ17RC7
Homologs : HomoloGeneEXOC3L4
Homology/Alignments : Family Browser (UCSC)EXOC3L4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEXOC3L4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EXOC3L4
dbVarEXOC3L4
ClinVarEXOC3L4
1000_GenomesEXOC3L4 
Exome Variant ServerEXOC3L4
ExAC (Exome Aggregation Consortium)EXOC3L4 (select the gene name)
Genetic variants : HAPMAP91828
Genomic Variants (DGV)EXOC3L4 [DGVbeta]
DECIPHEREXOC3L4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEXOC3L4 
Mutations
ICGC Data PortalEXOC3L4 
TCGA Data PortalEXOC3L4 
Broad Tumor PortalEXOC3L4
OASIS PortalEXOC3L4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEXOC3L4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEXOC3L4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EXOC3L4
DgiDB (Drug Gene Interaction Database)EXOC3L4
DoCM (Curated mutations)EXOC3L4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EXOC3L4 (select a term)
intoGenEXOC3L4
Cancer3DEXOC3L4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenEXOC3L4
Genetic Testing Registry EXOC3L4
NextProtQ17RC7 [Medical]
TSGene91828
GENETestsEXOC3L4
Target ValidationEXOC3L4
Huge Navigator EXOC3L4 [HugePedia]
snp3D : Map Gene to Disease91828
BioCentury BCIQEXOC3L4
ClinGenEXOC3L4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91828
Chemical/Pharm GKB GenePA134980508
Clinical trialEXOC3L4
Miscellaneous
canSAR (ICR)EXOC3L4 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEXOC3L4
EVEXEXOC3L4
GoPubMedEXOC3L4
iHOPEXOC3L4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:07:25 CEST 2017

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