Atlas of Genetics and Cytogenetics in Oncology and Haematology

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EXOC4 (exocyst complex component 4)

Identity

Other namesSEC8
SEC8L1
Sec8p
HGNC (Hugo) EXOC4
LocusID (NCBI) 60412
Location 7q33
Location_base_pair Starts at 132937823 and ends at 133168946 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)EXOC4   30389
Entrez_Gene (NCBI)EXOC4  60412  exocyst complex component 4
Cards
GeneCards (Weizmann)EXOC4
Ensembl (Hinxton)ENSG00000131558 [Gene_View]  chr7:132937823-133168946 [Contig_View]  EXOC4 [Vega]
AceView (NCBI)EXOC4
Genatlas (Paris)EXOC4
SOURCE (Stanford)NM_001037126 NM_021807
Genomic and cartography
GoldenPath (UCSC)EXOC4  -  7q33   chr7:132937823-133168946 +  7q33   [Description]    (hg19-Feb_2009)
EnsemblEXOC4 - 7q33 [CytoView]
Mapping of homologs : NCBIEXOC4 [Mapview]
OMIM608185   
Gene and transcription
Genbank (Entrez)AB051486 AF132734 AF380839 AK022751 AK027688
RefSeq transcript (SRS)NM_001037126 NM_021807
RefSeq transcript (Entrez)NM_001037126 NM_021807
RefSeq genomic (SRS)AC_000068 AC_000139 NC_000007 NC_018918 NT_007933 NT_079596 NW_001839072 NW_004078032
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NT_007933 NT_079596 NW_001839072 NW_004078032
Consensus coding sequences : CCDS (NCBI)EXOC4
Cluster EST : UnigeneHs.321273 [ SRS ] Hs.321273 [ NCBI ]
CGAP (NCI)Hs.321273
Alternative Splicing : Fast-db (Paris)GSHG0027740
Alternative Splicing GalleryENSG00000131558
Gene ExpressionEXOC4 [ NCBI-GEO ]   EXOC4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96A65 (SRS) Q96A65 (Uniprot)
NextProtQ96A65
With graphics : InterProQ96A65
Splice isoforms : SwissVarQ96A65(Swissvar)
Domains : Interpro (SRS)Sec8_exocyst   
Domains : Interpro (EBI)Sec8_exocyst   
Related proteins : CluSTrQ96A65
Domain families : Pfam (SRS)Sec8_exocyst (PF04048)   
Domain families : Pfam (Sanger)Sec8_exocyst (PF04048)   
Domain families : Pfam (NCBI)pfam04048   
DMDM60412
Blocks (Seattle)Q96A65
Human Protein AtlasENSG00000131558
HPRD12185
IPIIPI00059279   IPI01010576   IPI01009759   IPI01015160   IPI01009278   IPI00655649   
Protein Interaction databases
DIP (DOE-UCLA)Q96A65
IntAct (EBI)Q96A65
FunCoupENSG00000131558
REACTOMEEXOC4
Protein Interaction Database60412
BioGRIDEXOC4
InParanoidQ96A65
Interologous Interaction database Q96A65
IntegromeDBEXOC4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)EXOC4
SNP (GeneSNP Utah)EXOC4
SNP : HGBaseEXOC4
Genetic variants : HAPMAPEXOC4
Somatic Mutations in Cancer : COSMICEXOC4 
CONAN: Copy Number AnalysisEXOC4 
Mutations and Diseases : HGMDEXOC4
OMIM608185   
GENETests608185   
Disease Genetic AssociationEXOC4
Huge Navigator EXOC4 [HugePedia]  EXOC4 [HugeCancerGEM]
Genomic VariantsEXOC4  EXOC4 [DGVbeta]
ClinVarEXOC4
snp3D : Map Gene to Disease60412
General knowledge
Homologs : HomoloGeneEXOC4
Homology/Alignments : Family Browser (UCSC)EXOC4
Phylogenetic Trees/Animal Genes : TreeFamEXOC4
Chemical/Protein Interactions : CTD60412
Chemical/Pharm GKB GenePA134944654
Clinical trialEXOC4
Cancer Resource (Charite)ENSG00000131558
Ontology : AmiGOexocyst  protein binding  cytoplasm  plasma membrane  vesicle docking involved in exocytosis  protein transport  cellular membrane organization  growth cone membrane  myelin sheath abaxonal region  cellular protein metabolic process  protein N-terminus binding  
Ontology : EGO-EBIexocyst  protein binding  cytoplasm  plasma membrane  vesicle docking involved in exocytosis  protein transport  cellular membrane organization  growth cone membrane  myelin sheath abaxonal region  cellular protein metabolic process  protein N-terminus binding  
Pathways : KEGGTight junction
Other databases
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
PubGeneEXOC4
iHOPEXOC4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:53:58 CEST 2013
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