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EXOC8 (exocyst complex component 8)

Identity

Alias_symbol (synonym)SEC84
EXO84
Exo84p
Other alias
HGNC (Hugo) EXOC8
LocusID (NCBI) 149371
Atlas_Id 51551
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 231332731 and ends at 231337872 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EXOC8   24659
Cards
Entrez_Gene (NCBI)EXOC8  149371  exocyst complex component 8
AliasesEXO84; Exo84p; SEC84
GeneCards (Weizmann)EXOC8
Ensembl hg19 (Hinxton)ENSG00000116903 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000116903 [Gene_View]  chr1:231332731-231337872 [Contig_View]  EXOC8 [Vega]
ICGC DataPortalENSG00000116903
TCGA cBioPortalEXOC8
AceView (NCBI)EXOC8
Genatlas (Paris)EXOC8
WikiGenes149371
SOURCE (Princeton)EXOC8
Genetics Home Reference (NIH)EXOC8
Genomic and cartography
GoldenPath hg38 (UCSC)EXOC8  -     chr1:231332731-231337872 -  1q42.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EXOC8  -     1q42.2   [Description]    (hg19-Feb_2009)
EnsemblEXOC8 - 1q42.2 [CytoView hg19]  EXOC8 - 1q42.2 [CytoView hg38]
Mapping of homologs : NCBIEXOC8 [Mapview hg19]  EXOC8 [Mapview hg38]
OMIM615283   
Gene and transcription
Genbank (Entrez)AK096460 AL133716 BC035763 BM998007 CA775845
RefSeq transcript (Entrez)NM_175876
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EXOC8
Cluster EST : UnigeneHs.554892 [ NCBI ]
CGAP (NCI)Hs.554892
Alternative Splicing GalleryENSG00000116903
Gene ExpressionEXOC8 [ NCBI-GEO ]   EXOC8 [ EBI - ARRAY_EXPRESS ]   EXOC8 [ SEEK ]   EXOC8 [ MEM ]
Gene Expression Viewer (FireBrowse)EXOC8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)149371
GTEX Portal (Tissue expression)EXOC8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYI6
Splice isoforms : SwissVarQ8IYI6
PhosPhoSitePlusQ8IYI6
Domaine pattern : Prosite (Expaxy)PH_DOMAIN (PS50003)   
Domains : Interpro (EBI)Cullin_repeat-like_dom    Exo84    Exo84_C    PH_dom-like    PH_domain   
Domain families : Pfam (Sanger)Exo84_C (PF16528)   
Domain families : Pfam (NCBI)pfam16528   
Domain families : Smart (EMBL)PH (SM00233)  
Conserved Domain (NCBI)EXOC8
DMDM Disease mutations149371
Blocks (Seattle)EXOC8
SuperfamilyQ8IYI6
Human Protein AtlasENSG00000116903
Peptide AtlasQ8IYI6
HPRD09943
IPIIPI00028264   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYI6
IntAct (EBI)Q8IYI6
FunCoupENSG00000116903
BioGRIDEXOC8
STRING (EMBL)EXOC8
ZODIACEXOC8
Ontologies - Pathways
QuickGOQ8IYI6
Ontology : AmiGOexocyst  exocyst assembly  protein binding  late endosome  cytosol  cytosol  plasma membrane  endosome organization  protein transport  membrane  regulation of macroautophagy  Ral GTPase binding  extracellular matrix disassembly  growth cone  exocyst localization  
Ontology : EGO-EBIexocyst  exocyst assembly  protein binding  late endosome  cytosol  cytosol  plasma membrane  endosome organization  protein transport  membrane  regulation of macroautophagy  Ral GTPase binding  extracellular matrix disassembly  growth cone  exocyst localization  
NDEx NetworkEXOC8
Atlas of Cancer Signalling NetworkEXOC8
Wikipedia pathwaysEXOC8
Orthology - Evolution
OrthoDB149371
GeneTree (enSembl)ENSG00000116903
Phylogenetic Trees/Animal Genes : TreeFamEXOC8
HOVERGENQ8IYI6
HOGENOMQ8IYI6
Homologs : HomoloGeneEXOC8
Homology/Alignments : Family Browser (UCSC)EXOC8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerEXOC8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)EXOC8
dbVarEXOC8
ClinVarEXOC8
1000_GenomesEXOC8 
Exome Variant ServerEXOC8
ExAC (Exome Aggregation Consortium)EXOC8 (select the gene name)
Genetic variants : HAPMAP149371
Genomic Variants (DGV)EXOC8 [DGVbeta]
DECIPHEREXOC8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisEXOC8 
Mutations
ICGC Data PortalEXOC8 
TCGA Data PortalEXOC8 
Broad Tumor PortalEXOC8
OASIS PortalEXOC8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICEXOC8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDEXOC8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch EXOC8
DgiDB (Drug Gene Interaction Database)EXOC8
DoCM (Curated mutations)EXOC8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)EXOC8 (select a term)
intoGenEXOC8
Cancer3DEXOC8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615283   
Orphanet
MedgenEXOC8
Genetic Testing Registry EXOC8
NextProtQ8IYI6 [Medical]
TSGene149371
GENETestsEXOC8
Target ValidationEXOC8
Huge Navigator EXOC8 [HugePedia]
snp3D : Map Gene to Disease149371
BioCentury BCIQEXOC8
ClinGenEXOC8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149371
Chemical/Pharm GKB GenePA134991382
Clinical trialEXOC8
Miscellaneous
canSAR (ICR)EXOC8 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineEXOC8
EVEXEXOC8
GoPubMedEXOC8
iHOPEXOC8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:33:03 CEST 2017

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