Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

EZR-AS1 (EZR antisense RNA 1)

Identity

Alias_namesEZR antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) EZR-AS1
LocusID (NCBI) 101409257
Atlas_Id 62958
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 158817979 and ends at 158822239 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)EZR-AS1   40609
Cards
Entrez_Gene (NCBI)EZR-AS1  101409257  EZR antisense RNA 1
Aliases
GeneCards (Weizmann)EZR-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:158817979-158822239 [Contig_View]  EZR-AS1 [Vega]
TCGA cBioPortalEZR-AS1
AceView (NCBI)EZR-AS1
Genatlas (Paris)EZR-AS1
WikiGenes101409257
SOURCE (Princeton)EZR-AS1
Genetics Home Reference (NIH)EZR-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)EZR-AS1  -     chr6:158817979-158822239 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)EZR-AS1  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblEZR-AS1 - 6q25.3 [CytoView hg19]  EZR-AS1 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBIEZR-AS1 [Mapview hg19]  EZR-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI831881 BE552153 BX119561
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)EZR-AS1
Cluster EST : UnigeneHs.571207 [ NCBI ]
CGAP (NCI)Hs.571207
Gene ExpressionEZR-AS1 [ NCBI-GEO ]   EZR-AS1 [ EBI - ARRAY_EXPRESS ]   EZR-AS1 [ SEEK ]   EZR-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)EZR-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101409257
GTEX Portal (Tissue expression)EZR-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)EZR-AS1
DMDM Disease mutations101409257
Blocks (Seattle)EZR-AS1
Protein Interaction databases
BioGRIDEZR-AS1
STRING (EMBL)EZR-AS1
ZODIACEZR-AS1
Ontologies - Pathways
Huge Navigator EZR-AS1 [HugePedia]
snp3D : Map Gene to Disease101409257
BioCentury BCIQEZR-AS1
ClinGenEZR-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101409257
Clinical trialEZR-AS1
Miscellaneous
canSAR (ICR)EZR-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineEZR-AS1
EVEXEZR-AS1
GoPubMedEZR-AS1
iHOPEZR-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:44:26 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.