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FADS1 (fatty acid desaturase 1)

Identity

Alias (NCBI)D5D
FADS6
FADSD5
LLCDL1
TU12
HGNC (Hugo) FADS1
HGNC Alias symbD5D
FADSD5
TU12
FADS6
HGNC Alias namedelta-5 desaturase
 acyl-CoA (8-3)-desaturase
HGNC Previous nameLLCDL1
LocusID (NCBI) 3992
Atlas_Id 55715
Location 11q12.2  [Link to chromosome band 11q12]
Location_base_pair Starts at 61799629 and ends at 61817003 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FADS1 (11q12.2) / CLDN1 (3q28)FADS1 (11q12.2) / FADS1 (11q12.2)FADS1 (11q12.2) / TGOLN2 (2p11.2)
FADS1 (11q12.2) / VGLL3 (3p12.1)FADS1 (11q12.2) / YWHAE (17p13.3)LOC440944 () / FADS1 (11q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)FADS1   3574
Cards
Entrez_Gene (NCBI)FADS1    fatty acid desaturase 1
AliasesD5D; FADS6; FADSD5; LLCDL1; 
TU12
GeneCards (Weizmann)FADS1
Ensembl hg19 (Hinxton)ENSG00000149485 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149485 [Gene_View]  ENSG00000149485 [Sequence]  chr11:61799629-61817003 [Contig_View]  FADS1 [Vega]
ICGC DataPortalENSG00000149485
TCGA cBioPortalFADS1
AceView (NCBI)FADS1
Genatlas (Paris)FADS1
SOURCE (Princeton)FADS1
Genetics Home Reference (NIH)FADS1
Genomic and cartography
GoldenPath hg38 (UCSC)FADS1  -     chr11:61799629-61817003 -  11q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FADS1  -     11q12.2   [Description]    (hg19-Feb_2009)
GoldenPathFADS1 - 11q12.2 [CytoView hg19]  FADS1 - 11q12.2 [CytoView hg38]
ImmunoBaseENSG00000149485
Genome Data Viewer NCBIFADS1 [Mapview hg19]  
OMIM606148   
Gene and transcription
Genbank (Entrez)AF035284 AF084558 AF199596 AF226273 AF271778
RefSeq transcript (Entrez)NM_013402
Consensus coding sequences : CCDS (NCBI)FADS1
Gene ExpressionFADS1 [ NCBI-GEO ]   FADS1 [ EBI - ARRAY_EXPRESS ]   FADS1 [ SEEK ]   FADS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FADS1 [ Firebrowse - Broad ]
GenevisibleExpression of FADS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3992
GTEX Portal (Tissue expression)FADS1
Human Protein AtlasENSG00000149485-FADS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FADS1
Human Protein Atlas [tissue]ENSG00000149485-FADS1 [tissue]
HPRD06935
Protein Interaction databases
BioGRIDFADS1
STRING (EMBL)FADS1
ZODIACFADS1
Ontologies - Pathways
Litterature
PubMed212 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFADS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:08:48 CEST 2021

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