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FALEC (focally amplified long non-coding RNA in epithelial cancer)

Identity

Alias_namesLINC00568
long intergenic non-protein coding RNA 568
Alias_symbol (synonym)ncRNA-a1
FAL1
Other alias
HGNC (Hugo) FALEC
LocusID (NCBI) 100874054
Atlas_Id 54847
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 150515757 and ends at 150518032 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FALEC   43713
Cards
Entrez_Gene (NCBI)FALEC  100874054  focally amplified long non-coding RNA in epithelial cancer
AliasesFAL1; LINC00568; ncRNA-a1
GeneCards (Weizmann)FALEC
Ensembl hg19 (Hinxton)ENSG00000228126 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228126 [Gene_View]  chr1:150515757-150518032 [Contig_View]  FALEC [Vega]
ICGC DataPortalENSG00000228126
TCGA cBioPortalFALEC
AceView (NCBI)FALEC
Genatlas (Paris)FALEC
WikiGenes100874054
SOURCE (Princeton)FALEC
Genetics Home Reference (NIH)FALEC
Genomic and cartography
GoldenPath hg38 (UCSC)FALEC  -     chr1:150515757-150518032 +  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FALEC  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblFALEC - 1q21.2 [CytoView hg19]  FALEC - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBIFALEC [Mapview hg19]  FALEC [Mapview hg38]
OMIM616092   
Gene and transcription
Genbank (Entrez)AL713297
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FALEC
Cluster EST : UnigeneHs.576460 [ NCBI ]
CGAP (NCI)Hs.576460
Alternative Splicing GalleryENSG00000228126
Gene ExpressionFALEC [ NCBI-GEO ]   FALEC [ EBI - ARRAY_EXPRESS ]   FALEC [ SEEK ]   FALEC [ MEM ]
Gene Expression Viewer (FireBrowse)FALEC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874054
GTEX Portal (Tissue expression)FALEC
Human Protein AtlasENSG00000228126-FALEC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FALEC
DMDM Disease mutations100874054
Blocks (Seattle)FALEC
Human Protein Atlas [tissue]ENSG00000228126-FALEC [tissue]
Protein Interaction databases
FunCoupENSG00000228126
BioGRIDFALEC
STRING (EMBL)FALEC
ZODIACFALEC
Ontologies - Pathways
Huge Navigator FALEC [HugePedia]
snp3D : Map Gene to Disease100874054
BioCentury BCIQFALEC
ClinGenFALEC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874054
Clinical trialFALEC
Miscellaneous
canSAR (ICR)FALEC (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFALEC
EVEXFALEC
GoPubMedFALEC
iHOPFALEC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:36:05 CET 2017

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