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FAM101B (family with sequence similarity 101, member B)

Identity

Other aliasCFM1
HGNC (Hugo) FAM101B
LocusID (NCBI) 359845
Atlas_Id 62980
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 289771 and ends at 295731 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM101B   28705
Cards
Entrez_Gene (NCBI)FAM101B  359845  family with sequence similarity 101, member B
AliasesCFM1
GeneCards (Weizmann)FAM101B
Ensembl hg19 (Hinxton)ENSG00000183688 [Gene_View]  chr17:289771-295731 [Contig_View]  FAM101B [Vega]
Ensembl hg38 (Hinxton)ENSG00000183688 [Gene_View]  chr17:289771-295731 [Contig_View]  FAM101B [Vega]
ICGC DataPortalENSG00000183688
TCGA cBioPortalFAM101B
AceView (NCBI)FAM101B
Genatlas (Paris)FAM101B
WikiGenes359845
SOURCE (Princeton)FAM101B
Genetics Home Reference (NIH)FAM101B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM101B  -     chr17:289771-295731 -  17p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM101B  -     17p13.3   [Description]    (hg38-Dec_2013)
EnsemblFAM101B - 17p13.3 [CytoView hg19]  FAM101B - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBIFAM101B [Mapview hg19]  FAM101B [Mapview hg38]
OMIM615928   
Gene and transcription
Genbank (Entrez)AF085987 AK093557 BC014203 BC031341
RefSeq transcript (Entrez)NM_182705
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_024972 NW_004929404
Consensus coding sequences : CCDS (NCBI)FAM101B
Cluster EST : UnigeneHs.741149 [ NCBI ]
CGAP (NCI)Hs.741149
Alternative Splicing GalleryENSG00000183688
Gene ExpressionFAM101B [ NCBI-GEO ]   FAM101B [ EBI - ARRAY_EXPRESS ]   FAM101B [ SEEK ]   FAM101B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM101B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)359845
GTEX Portal (Tissue expression)FAM101B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5W9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5W9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5W9
Splice isoforms : SwissVarQ8N5W9
PhosPhoSitePlusQ8N5W9
Domains : Interpro (EBI)FAM101   
Domain families : Pfam (Sanger)FAM101 (PF15068)   
Domain families : Pfam (NCBI)pfam15068   
Conserved Domain (NCBI)FAM101B
DMDM Disease mutations359845
Blocks (Seattle)FAM101B
SuperfamilyQ8N5W9
Human Protein AtlasENSG00000183688
Peptide AtlasQ8N5W9
HPRD14646
IPIIPI00166945   
Protein Interaction databases
DIP (DOE-UCLA)Q8N5W9
IntAct (EBI)Q8N5W9
FunCoupENSG00000183688
BioGRIDFAM101B
STRING (EMBL)FAM101B
ZODIACFAM101B
Ontologies - Pathways
QuickGOQ8N5W9
Ontology : AmiGOepithelial to mesenchymal transition  cytoplasm  actin cytoskeleton  actin cytoskeleton organization  filamin binding  
Ontology : EGO-EBIepithelial to mesenchymal transition  cytoplasm  actin cytoskeleton  actin cytoskeleton organization  filamin binding  
NDEx NetworkFAM101B
Atlas of Cancer Signalling NetworkFAM101B
Wikipedia pathwaysFAM101B
Orthology - Evolution
OrthoDB359845
GeneTree (enSembl)ENSG00000183688
Phylogenetic Trees/Animal Genes : TreeFamFAM101B
HOVERGENQ8N5W9
HOGENOMQ8N5W9
Homologs : HomoloGeneFAM101B
Homology/Alignments : Family Browser (UCSC)FAM101B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM101B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM101B
dbVarFAM101B
ClinVarFAM101B
1000_GenomesFAM101B 
Exome Variant ServerFAM101B
ExAC (Exome Aggregation Consortium)FAM101B (select the gene name)
Genetic variants : HAPMAP359845
Genomic Variants (DGV)FAM101B [DGVbeta]
DECIPHER (Syndromes)17:289771-295731  ENSG00000183688
CONAN: Copy Number AnalysisFAM101B 
Mutations
ICGC Data PortalFAM101B 
TCGA Data PortalFAM101B 
Broad Tumor PortalFAM101B
OASIS PortalFAM101B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM101B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM101B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM101B
DgiDB (Drug Gene Interaction Database)FAM101B
DoCM (Curated mutations)FAM101B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM101B (select a term)
intoGenFAM101B
Cancer3DFAM101B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615928   
Orphanet
MedgenFAM101B
Genetic Testing Registry FAM101B
NextProtQ8N5W9 [Medical]
TSGene359845
GENETestsFAM101B
Huge Navigator FAM101B [HugePedia]
snp3D : Map Gene to Disease359845
BioCentury BCIQFAM101B
ClinGenFAM101B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD359845
Chemical/Pharm GKB GenePA143485463
Clinical trialFAM101B
Miscellaneous
canSAR (ICR)FAM101B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM101B
EVEXFAM101B
GoPubMedFAM101B
iHOPFAM101B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:22 CET 2017

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