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FAM104B (family with sequence similarity 104, member B)

Identity

Alias_namesCXorf44
chromosome X open reading frame 44
family with sequence similarity 104, member B
Alias_symbol (synonym)FLJ20434
Other alias
HGNC (Hugo) FAM104B
LocusID (NCBI) 90736
Atlas_Id 62983
Location Xp11.21  [Link to chromosome band Xp11]
Location_base_pair Starts at 55169535 and ends at 55187628 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM104B   25085
Cards
Entrez_Gene (NCBI)FAM104B  90736  family with sequence similarity 104, member B
AliasesCXorf44
GeneCards (Weizmann)FAM104B
Ensembl hg19 (Hinxton)ENSG00000182518 [Gene_View]  chrX:55169535-55187628 [Contig_View]  FAM104B [Vega]
Ensembl hg38 (Hinxton)ENSG00000182518 [Gene_View]  chrX:55169535-55187628 [Contig_View]  FAM104B [Vega]
ICGC DataPortalENSG00000182518
TCGA cBioPortalFAM104B
AceView (NCBI)FAM104B
Genatlas (Paris)FAM104B
WikiGenes90736
SOURCE (Princeton)FAM104B
Genetics Home Reference (NIH)FAM104B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM104B  -     chrX:55169535-55187628 -  Xp11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM104B  -     Xp11.21   [Description]    (hg38-Dec_2013)
EnsemblFAM104B - Xp11.21 [CytoView hg19]  FAM104B - Xp11.21 [CytoView hg38]
Mapping of homologs : NCBIFAM104B [Mapview hg19]  FAM104B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000441 AK299935 AK311333 AK311699 BC000919
RefSeq transcript (Entrez)NM_001166699 NM_001166700 NM_001166701 NM_001166702 NM_001166703 NM_001166704 NM_138362
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011630 NW_004929442
Consensus coding sequences : CCDS (NCBI)FAM104B
Cluster EST : UnigeneHs.415414 [ NCBI ]
CGAP (NCI)Hs.415414
Alternative Splicing GalleryENSG00000182518
Gene ExpressionFAM104B [ NCBI-GEO ]   FAM104B [ EBI - ARRAY_EXPRESS ]   FAM104B [ SEEK ]   FAM104B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM104B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90736
GTEX Portal (Tissue expression)FAM104B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5XKR9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5XKR9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5XKR9
Splice isoforms : SwissVarQ5XKR9
PhosPhoSitePlusQ5XKR9
Domains : Interpro (EBI)FAM104   
Domain families : Pfam (Sanger)FAM104 (PF15434)   
Domain families : Pfam (NCBI)pfam15434   
Conserved Domain (NCBI)FAM104B
DMDM Disease mutations90736
Blocks (Seattle)FAM104B
SuperfamilyQ5XKR9
Human Protein AtlasENSG00000182518
Peptide AtlasQ5XKR9
HPRD06457
IPIIPI00759746   IPI00395485   IPI00759656   IPI00954165   IPI00954281   IPI00954241   IPI00954216   
Protein Interaction databases
DIP (DOE-UCLA)Q5XKR9
IntAct (EBI)Q5XKR9
FunCoupENSG00000182518
BioGRIDFAM104B
STRING (EMBL)FAM104B
ZODIACFAM104B
Ontologies - Pathways
QuickGOQ5XKR9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM104B
Atlas of Cancer Signalling NetworkFAM104B
Wikipedia pathwaysFAM104B
Orthology - Evolution
OrthoDB90736
GeneTree (enSembl)ENSG00000182518
Phylogenetic Trees/Animal Genes : TreeFamFAM104B
HOVERGENQ5XKR9
HOGENOMQ5XKR9
Homologs : HomoloGeneFAM104B
Homology/Alignments : Family Browser (UCSC)FAM104B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM104B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM104B
dbVarFAM104B
ClinVarFAM104B
1000_GenomesFAM104B 
Exome Variant ServerFAM104B
ExAC (Exome Aggregation Consortium)FAM104B (select the gene name)
Genetic variants : HAPMAP90736
Genomic Variants (DGV)FAM104B [DGVbeta]
DECIPHER (Syndromes)X:55169535-55187628  ENSG00000182518
CONAN: Copy Number AnalysisFAM104B 
Mutations
ICGC Data PortalFAM104B 
TCGA Data PortalFAM104B 
Broad Tumor PortalFAM104B
OASIS PortalFAM104B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM104B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM104B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM104B
DgiDB (Drug Gene Interaction Database)FAM104B
DoCM (Curated mutations)FAM104B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM104B (select a term)
intoGenFAM104B
Cancer3DFAM104B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM104B
Genetic Testing Registry FAM104B
NextProtQ5XKR9 [Medical]
TSGene90736
GENETestsFAM104B
Huge Navigator FAM104B [HugePedia]
snp3D : Map Gene to Disease90736
BioCentury BCIQFAM104B
ClinGenFAM104B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90736
Chemical/Pharm GKB GenePA134945008
Clinical trialFAM104B
Miscellaneous
canSAR (ICR)FAM104B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM104B
EVEXFAM104B
GoPubMedFAM104B
iHOPFAM104B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:23 CET 2017

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