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FAM110B (family with sequence similarity 110 member B)

Identity

Alias_namesC8orf72
chromosome 8 open reading frame 72
family with sequence similarity 110, member B
Alias_symbol (synonym)MGC39325
Other alias
HGNC (Hugo) FAM110B
LocusID (NCBI) 90362
Atlas_Id 52773
Location 8q12.1  [Link to chromosome band 8q12]
Location_base_pair Starts at 57994554 and ends at 58149718 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM110B   28587
Cards
Entrez_Gene (NCBI)FAM110B  90362  family with sequence similarity 110 member B
AliasesC8orf72
GeneCards (Weizmann)FAM110B
Ensembl hg19 (Hinxton)ENSG00000169122 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169122 [Gene_View]  chr8:57994554-58149718 [Contig_View]  FAM110B [Vega]
ICGC DataPortalENSG00000169122
TCGA cBioPortalFAM110B
AceView (NCBI)FAM110B
Genatlas (Paris)FAM110B
WikiGenes90362
SOURCE (Princeton)FAM110B
Genetics Home Reference (NIH)FAM110B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM110B  -     chr8:57994554-58149718 +  8q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM110B  -     8q12.1   [Description]    (hg19-Feb_2009)
EnsemblFAM110B - 8q12.1 [CytoView hg19]  FAM110B - 8q12.1 [CytoView hg38]
Mapping of homologs : NCBIFAM110B [Mapview hg19]  FAM110B [Mapview hg38]
OMIM611394   
Gene and transcription
Genbank (Entrez)AK023658 AK026141 AK092221 AY937246 BC024294
RefSeq transcript (Entrez)NM_147189
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM110B
Cluster EST : UnigeneHs.154652 [ NCBI ]
CGAP (NCI)Hs.154652
Alternative Splicing GalleryENSG00000169122
Gene ExpressionFAM110B [ NCBI-GEO ]   FAM110B [ EBI - ARRAY_EXPRESS ]   FAM110B [ SEEK ]   FAM110B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM110B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90362
GTEX Portal (Tissue expression)FAM110B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TC76   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TC76  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TC76
Splice isoforms : SwissVarQ8TC76
PhosPhoSitePlusQ8TC76
Domains : Interpro (EBI)FAM110    FAM110_C    FAM110_N   
Domain families : Pfam (Sanger)FAM110_C (PF14160)    FAM110_N (PF14161)   
Domain families : Pfam (NCBI)pfam14160    pfam14161   
Conserved Domain (NCBI)FAM110B
DMDM Disease mutations90362
Blocks (Seattle)FAM110B
SuperfamilyQ8TC76
Human Protein AtlasENSG00000169122
Peptide AtlasQ8TC76
HPRD14609
IPIIPI00478176   
Protein Interaction databases
DIP (DOE-UCLA)Q8TC76
IntAct (EBI)Q8TC76
FunCoupENSG00000169122
BioGRIDFAM110B
STRING (EMBL)FAM110B
ZODIACFAM110B
Ontologies - Pathways
QuickGOQ8TC76
Ontology : AmiGOmitochondrion  microtubule organizing center  cytosol  
Ontology : EGO-EBImitochondrion  microtubule organizing center  cytosol  
NDEx NetworkFAM110B
Atlas of Cancer Signalling NetworkFAM110B
Wikipedia pathwaysFAM110B
Orthology - Evolution
OrthoDB90362
GeneTree (enSembl)ENSG00000169122
Phylogenetic Trees/Animal Genes : TreeFamFAM110B
HOVERGENQ8TC76
HOGENOMQ8TC76
Homologs : HomoloGeneFAM110B
Homology/Alignments : Family Browser (UCSC)FAM110B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM110B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM110B
dbVarFAM110B
ClinVarFAM110B
1000_GenomesFAM110B 
Exome Variant ServerFAM110B
ExAC (Exome Aggregation Consortium)FAM110B (select the gene name)
Genetic variants : HAPMAP90362
Genomic Variants (DGV)FAM110B [DGVbeta]
DECIPHERFAM110B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM110B 
Mutations
ICGC Data PortalFAM110B 
TCGA Data PortalFAM110B 
Broad Tumor PortalFAM110B
OASIS PortalFAM110B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM110B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM110B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM110B
DgiDB (Drug Gene Interaction Database)FAM110B
DoCM (Curated mutations)FAM110B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM110B (select a term)
intoGenFAM110B
Cancer3DFAM110B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611394   
Orphanet
MedgenFAM110B
Genetic Testing Registry FAM110B
NextProtQ8TC76 [Medical]
TSGene90362
GENETestsFAM110B
Target ValidationFAM110B
Huge Navigator FAM110B [HugePedia]
snp3D : Map Gene to Disease90362
BioCentury BCIQFAM110B
ClinGenFAM110B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90362
Chemical/Pharm GKB GenePA162385659
Clinical trialFAM110B
Miscellaneous
canSAR (ICR)FAM110B (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM110B
EVEXFAM110B
GoPubMedFAM110B
iHOPFAM110B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:33:13 CEST 2017

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