Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM110C (family with sequence similarity 110, member C)

Identity

Alias_namesfamily with sequence similarity 110, member C
Other alias-
HGNC (Hugo) FAM110C
LocusID (NCBI) 642273
Atlas_Id 62991
Location 2p25.3  [Link to chromosome band 2p25]
Location_base_pair Starts at 38814 and ends at 46588 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM110C   33340
Cards
Entrez_Gene (NCBI)FAM110C  642273  family with sequence similarity 110, member C
Aliases
GeneCards (Weizmann)FAM110C
Ensembl hg19 (Hinxton)ENSG00000184731 [Gene_View]  chr2:38814-46588 [Contig_View]  FAM110C [Vega]
Ensembl hg38 (Hinxton)ENSG00000184731 [Gene_View]  chr2:38814-46588 [Contig_View]  FAM110C [Vega]
ICGC DataPortalENSG00000184731
TCGA cBioPortalFAM110C
AceView (NCBI)FAM110C
Genatlas (Paris)FAM110C
WikiGenes642273
SOURCE (Princeton)FAM110C
Genetics Home Reference (NIH)FAM110C
Genomic and cartography
GoldenPath hg19 (UCSC)FAM110C  -     chr2:38814-46588 -  2p25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM110C  -     2p25.3   [Description]    (hg38-Dec_2013)
EnsemblFAM110C - 2p25.3 [CytoView hg19]  FAM110C - 2p25.3 [CytoView hg38]
Mapping of homologs : NCBIFAM110C [Mapview hg19]  FAM110C [Mapview hg38]
OMIM611395   
Gene and transcription
Genbank (Entrez)AK302544 AL137761 DQ431183
RefSeq transcript (Entrez)NM_001077710
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005334 NW_004929296
Consensus coding sequences : CCDS (NCBI)FAM110C
Cluster EST : UnigeneHs.8379 [ NCBI ]
CGAP (NCI)Hs.8379
Alternative Splicing GalleryENSG00000184731
Gene ExpressionFAM110C [ NCBI-GEO ]   FAM110C [ EBI - ARRAY_EXPRESS ]   FAM110C [ SEEK ]   FAM110C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM110C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642273
GTEX Portal (Tissue expression)FAM110C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ1W6H9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ1W6H9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ1W6H9
Splice isoforms : SwissVarQ1W6H9
PhosPhoSitePlusQ1W6H9
Domains : Interpro (EBI)FAM110    FAM110_C    FAM110_N   
Domain families : Pfam (Sanger)FAM110_C (PF14160)    FAM110_N (PF14161)   
Domain families : Pfam (NCBI)pfam14160    pfam14161   
Conserved Domain (NCBI)FAM110C
DMDM Disease mutations642273
Blocks (Seattle)FAM110C
SuperfamilyQ1W6H9
Human Protein AtlasENSG00000184731
Peptide AtlasQ1W6H9
IPIIPI00334809   
Protein Interaction databases
DIP (DOE-UCLA)Q1W6H9
IntAct (EBI)Q1W6H9
FunCoupENSG00000184731
BioGRIDFAM110C
STRING (EMBL)FAM110C
ZODIACFAM110C
Ontologies - Pathways
QuickGOQ1W6H9
Ontology : AmiGOspindle pole  protein binding  nucleoplasm  cytoplasm  microtubule organizing center  microtubule  cell cortex  positive regulation of cell migration  alpha-tubulin binding  positive regulation of protein kinase B signaling  regulation of cell projection assembly  
Ontology : EGO-EBIspindle pole  protein binding  nucleoplasm  cytoplasm  microtubule organizing center  microtubule  cell cortex  positive regulation of cell migration  alpha-tubulin binding  positive regulation of protein kinase B signaling  regulation of cell projection assembly  
NDEx NetworkFAM110C
Atlas of Cancer Signalling NetworkFAM110C
Wikipedia pathwaysFAM110C
Orthology - Evolution
OrthoDB642273
GeneTree (enSembl)ENSG00000184731
Phylogenetic Trees/Animal Genes : TreeFamFAM110C
HOVERGENQ1W6H9
HOGENOMQ1W6H9
Homologs : HomoloGeneFAM110C
Homology/Alignments : Family Browser (UCSC)FAM110C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM110C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM110C
dbVarFAM110C
ClinVarFAM110C
1000_GenomesFAM110C 
Exome Variant ServerFAM110C
ExAC (Exome Aggregation Consortium)FAM110C (select the gene name)
Genetic variants : HAPMAP642273
Genomic Variants (DGV)FAM110C [DGVbeta]
DECIPHER (Syndromes)2:38814-46588  ENSG00000184731
CONAN: Copy Number AnalysisFAM110C 
Mutations
ICGC Data PortalFAM110C 
TCGA Data PortalFAM110C 
Broad Tumor PortalFAM110C
OASIS PortalFAM110C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM110C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM110C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM110C
DgiDB (Drug Gene Interaction Database)FAM110C
DoCM (Curated mutations)FAM110C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM110C (select a term)
intoGenFAM110C
Cancer3DFAM110C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611395   
Orphanet
MedgenFAM110C
Genetic Testing Registry FAM110C
NextProtQ1W6H9 [Medical]
TSGene642273
GENETestsFAM110C
Huge Navigator FAM110C [HugePedia]
snp3D : Map Gene to Disease642273
BioCentury BCIQFAM110C
ClinGenFAM110C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642273
Chemical/Pharm GKB GenePA162385674
Clinical trialFAM110C
Miscellaneous
canSAR (ICR)FAM110C (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM110C
EVEXFAM110C
GoPubMedFAM110C
iHOPFAM110C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:03:25 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.