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FAM124B (family with sequence similarity 124B)

Identity

Alias_namesfamily with sequence similarity 124B
Alias_symbol (synonym)FLJ22746
Other alias-
HGNC (Hugo) FAM124B
LocusID (NCBI) 79843
Atlas_Id 63009
Location 2q36.2  [Link to chromosome band 2q36]
Location_base_pair Starts at 225243415 and ends at 225266711 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DIS3L2 (2q37.1) / FAM124B (2q36.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM124B   26224
Cards
Entrez_Gene (NCBI)FAM124B  79843  family with sequence similarity 124B
Aliases
GeneCards (Weizmann)FAM124B
Ensembl hg19 (Hinxton)ENSG00000124019 [Gene_View]  chr2:225243415-225266711 [Contig_View]  FAM124B [Vega]
Ensembl hg38 (Hinxton)ENSG00000124019 [Gene_View]  chr2:225243415-225266711 [Contig_View]  FAM124B [Vega]
ICGC DataPortalENSG00000124019
TCGA cBioPortalFAM124B
AceView (NCBI)FAM124B
Genatlas (Paris)FAM124B
WikiGenes79843
SOURCE (Princeton)FAM124B
Genetics Home Reference (NIH)FAM124B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM124B  -     chr2:225243415-225266711 -  2q36.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM124B  -     2q36.2   [Description]    (hg38-Dec_2013)
EnsemblFAM124B - 2q36.2 [CytoView hg19]  FAM124B - 2q36.2 [CytoView hg38]
Mapping of homologs : NCBIFAM124B [Mapview hg19]  FAM124B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026399 AK075126 BC025754 HQ447160
RefSeq transcript (Entrez)NM_001122779 NM_024785
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)FAM124B
Cluster EST : UnigeneHs.147585 [ NCBI ]
CGAP (NCI)Hs.147585
Alternative Splicing GalleryENSG00000124019
Gene ExpressionFAM124B [ NCBI-GEO ]   FAM124B [ EBI - ARRAY_EXPRESS ]   FAM124B [ SEEK ]   FAM124B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM124B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79843
GTEX Portal (Tissue expression)FAM124B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H5Z6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H5Z6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H5Z6
Splice isoforms : SwissVarQ9H5Z6
PhosPhoSitePlusQ9H5Z6
Domains : Interpro (EBI)FAM124   
Domain families : Pfam (Sanger)FAM124 (PF15067)   
Domain families : Pfam (NCBI)pfam15067   
Conserved Domain (NCBI)FAM124B
DMDM Disease mutations79843
Blocks (Seattle)FAM124B
SuperfamilyQ9H5Z6
Human Protein AtlasENSG00000124019
Peptide AtlasQ9H5Z6
HPRD08663
IPIIPI00745087   IPI00152129   
Protein Interaction databases
DIP (DOE-UCLA)Q9H5Z6
IntAct (EBI)Q9H5Z6
FunCoupENSG00000124019
BioGRIDFAM124B
STRING (EMBL)FAM124B
ZODIACFAM124B
Ontologies - Pathways
QuickGOQ9H5Z6
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM124B
Atlas of Cancer Signalling NetworkFAM124B
Wikipedia pathwaysFAM124B
Orthology - Evolution
OrthoDB79843
GeneTree (enSembl)ENSG00000124019
Phylogenetic Trees/Animal Genes : TreeFamFAM124B
HOVERGENQ9H5Z6
HOGENOMQ9H5Z6
Homologs : HomoloGeneFAM124B
Homology/Alignments : Family Browser (UCSC)FAM124B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM124B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM124B
dbVarFAM124B
ClinVarFAM124B
1000_GenomesFAM124B 
Exome Variant ServerFAM124B
ExAC (Exome Aggregation Consortium)FAM124B (select the gene name)
Genetic variants : HAPMAP79843
Genomic Variants (DGV)FAM124B [DGVbeta]
DECIPHER (Syndromes)2:225243415-225266711  ENSG00000124019
CONAN: Copy Number AnalysisFAM124B 
Mutations
ICGC Data PortalFAM124B 
TCGA Data PortalFAM124B 
Broad Tumor PortalFAM124B
OASIS PortalFAM124B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM124B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM124B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM124B
DgiDB (Drug Gene Interaction Database)FAM124B
DoCM (Curated mutations)FAM124B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM124B (select a term)
intoGenFAM124B
Cancer3DFAM124B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM124B
Genetic Testing Registry FAM124B
NextProtQ9H5Z6 [Medical]
TSGene79843
GENETestsFAM124B
Huge Navigator FAM124B [HugePedia]
snp3D : Map Gene to Disease79843
BioCentury BCIQFAM124B
ClinGenFAM124B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79843
Chemical/Pharm GKB GenePA162385815
Clinical trialFAM124B
Miscellaneous
canSAR (ICR)FAM124B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM124B
EVEXFAM124B
GoPubMedFAM124B
iHOPFAM124B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:03:28 CET 2017

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