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FAM126A (family with sequence similarity 126 member A)

Identity

Alias_namesfamily with sequence similarity 126, member A
Alias_symbol (synonym)DRCTNNB1A
HCC
HYCC1
hyccin
Other aliasHLD5
HGNC (Hugo) FAM126A
LocusID (NCBI) 84668
Atlas_Id 63010
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 22941259 and ends at 23014151 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM126A (7p15.3) / HIBADH (7p15.2)FAM126A (7p15.3) / TRO (Xp11.21)PDLIM5 (4q22.3) / FAM126A (7p15.3)
RBBP8 (18q11.2) / FAM126A (7p15.3)STXBP5 (6q24.3) / FAM126A (7p15.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM126A   24587
Cards
Entrez_Gene (NCBI)FAM126A  84668  family with sequence similarity 126 member A
AliasesDRCTNNB1A; HCC; HLD5; HYCC1
GeneCards (Weizmann)FAM126A
Ensembl hg19 (Hinxton)ENSG00000122591 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000122591 [Gene_View]  chr7:22941259-23014151 [Contig_View]  FAM126A [Vega]
ICGC DataPortalENSG00000122591
TCGA cBioPortalFAM126A
AceView (NCBI)FAM126A
Genatlas (Paris)FAM126A
WikiGenes84668
SOURCE (Princeton)FAM126A
Genetics Home Reference (NIH)FAM126A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM126A  -     chr7:22941259-23014151 -  7p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM126A  -     7p15.3   [Description]    (hg19-Feb_2009)
EnsemblFAM126A - 7p15.3 [CytoView hg19]  FAM126A - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBIFAM126A [Mapview hg19]  FAM126A [Mapview hg38]
OMIM610531   610532   
Gene and transcription
Genbank (Entrez)AA811006 AB030241 AK054887 AK056319 AK057686
RefSeq transcript (Entrez)NM_032581
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM126A
Cluster EST : UnigeneHs.85603 [ NCBI ]
CGAP (NCI)Hs.85603
Alternative Splicing GalleryENSG00000122591
Gene ExpressionFAM126A [ NCBI-GEO ]   FAM126A [ EBI - ARRAY_EXPRESS ]   FAM126A [ SEEK ]   FAM126A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM126A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84668
GTEX Portal (Tissue expression)FAM126A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BYI3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BYI3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BYI3
Splice isoforms : SwissVarQ9BYI3
PhosPhoSitePlusQ9BYI3
Domains : Interpro (EBI)Hyccin   
Domain families : Pfam (Sanger)Hyccin (PF09790)   
Domain families : Pfam (NCBI)pfam09790   
Conserved Domain (NCBI)FAM126A
DMDM Disease mutations84668
Blocks (Seattle)FAM126A
PDB (SRS)5DSE   
PDB (PDBSum)5DSE   
PDB (IMB)5DSE   
PDB (RSDB)5DSE   
Structural Biology KnowledgeBase5DSE   
SCOP (Structural Classification of Proteins)5DSE   
CATH (Classification of proteins structures)5DSE   
SuperfamilyQ9BYI3
Human Protein AtlasENSG00000122591
Peptide AtlasQ9BYI3
HPRD16837
IPIIPI00102291   IPI00828124   IPI00910812   IPI00917461   IPI00917287   IPI00915994   
Protein Interaction databases
DIP (DOE-UCLA)Q9BYI3
IntAct (EBI)Q9BYI3
FunCoupENSG00000122591
BioGRIDFAM126A
STRING (EMBL)FAM126A
ZODIACFAM126A
Ontologies - Pathways
QuickGOQ9BYI3
Ontology : AmiGOsignal transducer activity  protein binding  cytosol  plasma membrane  signal transduction  myelination  neuron projection  phosphatidylinositol phosphorylation  establishment of protein localization to plasma membrane  
Ontology : EGO-EBIsignal transducer activity  protein binding  cytosol  plasma membrane  signal transduction  myelination  neuron projection  phosphatidylinositol phosphorylation  establishment of protein localization to plasma membrane  
NDEx NetworkFAM126A
Atlas of Cancer Signalling NetworkFAM126A
Wikipedia pathwaysFAM126A
Orthology - Evolution
OrthoDB84668
GeneTree (enSembl)ENSG00000122591
Phylogenetic Trees/Animal Genes : TreeFamFAM126A
HOVERGENQ9BYI3
HOGENOMQ9BYI3
Homologs : HomoloGeneFAM126A
Homology/Alignments : Family Browser (UCSC)FAM126A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM126A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM126A
dbVarFAM126A
ClinVarFAM126A
1000_GenomesFAM126A 
Exome Variant ServerFAM126A
ExAC (Exome Aggregation Consortium)FAM126A (select the gene name)
Genetic variants : HAPMAP84668
Genomic Variants (DGV)FAM126A [DGVbeta]
DECIPHERFAM126A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM126A 
Mutations
ICGC Data PortalFAM126A 
TCGA Data PortalFAM126A 
Broad Tumor PortalFAM126A
OASIS PortalFAM126A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM126A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM126A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch FAM126A
DgiDB (Drug Gene Interaction Database)FAM126A
DoCM (Curated mutations)FAM126A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM126A (select a term)
intoGenFAM126A
Cancer3DFAM126A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610531    610532   
Orphanet11630   
MedgenFAM126A
Genetic Testing Registry FAM126A
NextProtQ9BYI3 [Medical]
TSGene84668
GENETestsFAM126A
Target ValidationFAM126A
Huge Navigator FAM126A [HugePedia]
snp3D : Map Gene to Disease84668
BioCentury BCIQFAM126A
ClinGenFAM126A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84668
Chemical/Pharm GKB GenePA162385852
Clinical trialFAM126A
Miscellaneous
canSAR (ICR)FAM126A (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM126A
EVEXFAM126A
GoPubMedFAM126A
iHOPFAM126A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:47:47 CEST 2017

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